Gene Information

Name : PCC21_030110 (PCC21_030110)
Accession : YP_006647667.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Resistance
Product : streptogramin A acetyl transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3391413 - 3392066 bp
Length : 654 bp
Strand : +
Note : -

DNA sequence : 
ATGGAGACCATTTTGAACGGACCAGACCCTGATAACCGCTACCCCATGGCCGGTTTCCCCCAAGTGTGTTTCATCAAGAA
TATTGTCACCAACCCGAATATTGAAATTGGCGACTACACCTATTATGACGATCCCGATGGTGCGGAAAATTTCGAGCAAA
ATGTGCTCTACCACTATCCGTTTCTCGGCGACAAACTAGTCATCGGCAAGTTTTGCGCTATCGCGCGTGGCGCAAAATTT
ATCATGAACGGGGCTAATCACCGGCTTTCCGGCCTGTCGACTTACCCGTTTCAGATTTTTGGCAACGGCTGGGAAAAAGT
AACGCCCAAGCCCGGCGATCTGCCTTACAAAGGTGACACGCACATCGGCAATGATGTCTGGATTGGCTATGACGCGCTGA
TCATGCCCGGCATCCGCATTGGAAATGGCGCCATCATTGCGTCACGCGCCGTGGTCACCGCCGATGTGCCCGCTTATACG
GTCGTTGGCGGCAATCCGGCCAAAATCCTTAAAGCCCGTTTTGCGCCGGACGTCATCGAGGCACTGGAAGCGCTGAGCTG
GTGGGACTGGCCGATAGAAAAAATCACCCGTCATCTGGAAATCATCGCTGCGGGTGATATTGCGGCACTGCAAGCTGGCC
ATCTGTCCGAATAA

Protein sequence : 
METILNGPDPDNRYPMAGFPQVCFIKNIVTNPNIEIGDYTYYDDPDGAENFEQNVLYHYPFLGDKLVIGKFCAIARGAKF
IMNGANHRLSGLSTYPFQIFGNGWEKVTPKPGDLPYKGDTHIGNDVWIGYDALIMPGIRIGNGAIIASRAVVTADVPAYT
VVGGNPAKILKARFAPDVIEALEALSWWDWPIEKITRHLEIIAAGDIAALQAGHLSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 6e-29 42
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 2e-29 41
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_030110 YP_006647667.1 streptogramin A acetyl transferase AM180355.1.gene2499. Protein 3e-47 49
PCC21_030110 YP_006647667.1 streptogramin A acetyl transferase NC_002516.2.878374.p Protein 2e-30 45
PCC21_030110 YP_006647667.1 streptogramin A acetyl transferase AY123251.gene2.p01 Protein 2e-29 42
PCC21_030110 YP_006647667.1 streptogramin A acetyl transferase JF268688.1.gene6.p01 Protein 2e-29 42
PCC21_030110 YP_006647667.1 streptogramin A acetyl transferase AY740681.1.gene5.p01 Protein 8e-30 41
PCC21_030110 YP_006647667.1 streptogramin A acetyl transferase AF322577.2.gene4.p01 Protein 8e-30 41