Gene Information

Name : PCC21_029670 (PCC21_029670)
Accession : YP_006647623.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3335176 - 3336342 bp
Length : 1167 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATAGCGATTAGCGGAACGGGATATGTCGGTTTATCGAATGGATTATTATTAGCGCAACAGCATCAGGTTGTGGC
GTTGGATATTGTGGCGGAAAAAGTGGCGCTGTTGAATCAACGAAAATCGCCGATTAATGACGCCGAGATTGAGCGTTTTT
TACAACATGAAACGCTGAATTTTTCCGCGACGCTGGATAAGCATGAGGCGTATACCGACGCGCAGTTCGTGATCATCGCT
ACGCCGACAGATTATGACCCGCAAACCAACTATTTCAACACGTCGTCCGTAGAGGCCGTCATTCGCGACGTGCTGGCGAT
TAATCCGCAGGCCATTATGGTGATTAAATCGACGGTGCCCGTGGGCTTCACCGAGAAAATCAGCCAGCAGTTGGATACGG
ATAACGTCATTTTTTCACCCGAGTTTTTGCGTGAAGGCAAGGCACTACACGACAATCTTTACCCGTCGCGGATTGTGGTG
GGTGAGCGGTCAGAAAGGGCGAGATTCTTCGCTAACCTATTGATGGAATGCGCATTAAAAAAAGATATTCGCGTGCTGTT
TACCGACCCAACCGAAGCTGAAGCGATAAAATTGTTTGCAAATACCTTTCTGGCGATGCGCGTGGCCTACTTTAACGAGT
TGGACAGCTATGCTGAATCGCTGGGGCTGAATACCCGGCAGATTATTGAAGGGGTATGCCTCGATCCGCGTATTGGCGAT
TACTACAATAATCCGTCGTTCGGCTATGGCGGCTACTGCTTACCGAAGGATACCCGGCAGCTTTTGGCGAATTATCGTAC
CGTGCCGAATAACCTGATCAAGGCTATCGTGGATGCTAACCATACACGAAAAGATTTCATTGCCGACACGATTATCCGTC
GCCATCCGAAAACCGTCGGCGTCCACCGCCTCATCATGAAAGCGGGGTCGGATAATTTTCGCTTCTCTTCCATTCAGGGG
ATTATGAAGAGAATAAAAGCGAAAGGAATCAAGGTGGTAATTTATGAACCTGGGATTGATGATGATGATTTTTTAGATTT
CCCTATCATTCATCAACTCGACAGTTTCAAACAACAGTGTGACATTATTATTACCAATCGTTATGCCGATGAATTAAACG
ATGTGAGGGGCAAAGTCTATACGCGAGACTTATTTGGCGAAGATTGA

Protein sequence :
MKIAISGTGYVGLSNGLLLAQQHQVVALDIVAEKVALLNQRKSPINDAEIERFLQHETLNFSATLDKHEAYTDAQFVIIA
TPTDYDPQTNYFNTSSVEAVIRDVLAINPQAIMVIKSTVPVGFTEKISQQLDTDNVIFSPEFLREGKALHDNLYPSRIVV
GERSERARFFANLLMECALKKDIRVLFTDPTEAEAIKLFANTFLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGD
YYNNPSFGYGGYCLPKDTRQLLANYRTVPNNLIKAIVDANHTRKDFIADTIIRRHPKTVGVHRLIMKAGSDNFRFSSIQG
IMKRIKAKGIKVVIYEPGIDDDDFLDFPIIHQLDSFKQQCDIIITNRYADELNDVRGKVYTRDLFGED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 4e-89 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_029670 YP_006647623.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 2e-95 54