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Name : PCC21_029310 (PCC21_029310) Accession : YP_006647587.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 3294550 - 3295776 bp Length : 1227 bp Strand : - Note : - DNA sequence : ATGGCACAGTACCACTATCAGGCGCTGGATGCGCAGGGGAAAAAATGCCGTGGCGCTCAGGAGGCCGACTCTGCCAGACA GGCGCGTCAGCTATTGCGGGAGCGCGGGCTGGTGCCGCTGTCGGTTGATGAAAACCGAGACGACCAGCAGAAATCCGGTT CTACAGGATTCTCCCTCCGTCGCAAAATTCGGATCAGCACCTCGGATTTGGCGCTGCTGACTCGCCAGTTGGCCACGCTG GTGGCCGCGTCGTTGCCGCTGGAAGAAGCGCTGGATGCGGTGGCAAAACAGAGTGAAAAACCACAGCTGAGCCAGTTGAT GGCGGCGGTGCGCAGCAAAGTCATGGAAGGTCACTCGCTGGCCGATGCCATGAAATGCTTCCCCAGCAGCTTCGAACGGC TGTATTGCGCGATGGTCGCCGCAGGCGAGACGTCCGGTCACCTTGATGCCGTCTTGAACCGATTAGCGGACTACACCGAA CAGCGCCAGCAGATGCGTAGCCGCATCCAGCAGGCGATGATCTACCCGTGTGTGTTAACCGTGGTCGCGATTGCCGTGGT CAGCATTTTGCTGTCCGTCGTGGTGCCGAAAGTCGTCGAGCAATTTATTCATATGAAGCAGGCACTGCCGCTTTCAACCC GCGTATTGATGGGGATGAGCGATGCCGTGCGCACGTTTGGACCGTGGATGCTACTGGCATTGCTGGCTGGGTTTATGGCA TTCCGCGTGATGCTGCGGCAGGAAAAGCGGCGCATCAGTTTTCATCGCCGTCTGCTGCATTTACCGCTGATCGGCCGTAT AGCGCGTGGCTTAAATACGGCACGCTACGCGCGGACGCTCAGTATTCTTAACGCCAGTGCGGTGCCGTTGCTACAGGCGA TGCGCATTAGCGGCGATGTCATGAGTAATGACTATGCCCGCCATCGGCTCTCGCTGGCTACGGATGCGGTACGAGAGGGC GTCAGCCTGCACAAAGCGCTGGAACAGACGGCGCTTTTCCCCCCAATGATGCGCCATATGATCGCCAGCGGTGAACGCAG CGGCGAGCTGGACAGCATGCTGGAACGGGCGGCGGATAATCAGGATCGGGAATTCAGTTCGCAGATGACGCTGGCGCTGG GGCTATTTGAGCCTCTGCTGGTGGTCAGCATGGCGGCGGTGGTGTTGTTTATCGTACTCGCGATTTTACAACCGATTCTG CAACTGAATACGTTAATGAGTTCGTAA Protein sequence : MAQYHYQALDAQGKKCRGAQEADSARQARQLLRERGLVPLSVDENRDDQQKSGSTGFSLRRKIRISTSDLALLTRQLATL VAASLPLEEALDAVAKQSEKPQLSQLMAAVRSKVMEGHSLADAMKCFPSSFERLYCAMVAAGETSGHLDAVLNRLADYTE QRQQMRSRIQQAMIYPCVLTVVAIAVVSILLSVVVPKVVEQFIHMKQALPLSTRVLMGMSDAVRTFGPWMLLALLAGFMA FRVMLRQEKRRISFHRRLLHLPLIGRIARGLNTARYARTLSILNASAVPLLQAMRISGDVMSNDYARHRLSLATDAVREG VSLHKALEQTALFPPMMRHMIASGERSGELDSMLERAADNQDREFSSQMTLALGLFEPLLVVSMAAVVLFIVLAILQPIL QLNTLMSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 6e-89 | 55 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-88 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PCC21_029310 | YP_006647587.1 | general secretion pathway protein F | VFG2049 | Protein | 1e-85 | 54 |
| PCC21_029310 | YP_006647587.1 | general secretion pathway protein F | VFG0181 | Protein | 4e-86 | 53 |
| PCC21_029310 | YP_006647587.1 | general secretion pathway protein F | VFG1870 | Protein | 5e-72 | 43 |
