Gene Information

Name : PCC21_029300 (PCC21_029300)
Accession : YP_006647586.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3294047 - 3294517 bp
Length : 471 bp
Strand : -
Note : -

DNA sequence : 
ATGCAACAGTCTCAGCGTGGTTGTGGACAAAATAGTTATGGTCAGAGCGGTAATCGTCAGCGTGGTTTTACCCTGTTGGA
GATTATGGTGGTCATCGTCATTCTCGGCGTACTGGCGAGTCTGGTGGTGCCCAATCTGATGGGGAATAAGGAAAAGGCGG
ATCGGCAAAAAGCCGTCAGCGATATCGTGTCTCTCGAAAGCGCACTCGATATGTACAAGCTGGATAACAACCGTTACCCG
TCCACCGAGCAGGGGCTGAAGGCGCTGGTAACGAAGCCGACGGTACAGCCAGAACCGCGTAACTACCCAGCCGATGGCTA
TATTCGCCGCCTGCCGCAAGATCCGTGGGGCACGGAGTATCAACTGCTGAACCCTGGGCAGCACGGCAAGCTCGATATCT
TCTCTCTGGGGCCAGACGGTATGCCGGGAACGGAAGATGACATCGGCAACTGGAATCTTGATAAGAAATAA

Protein sequence : 
MQQSQRGCGQNSYGQSGNRQRGFTLLEIMVVIVILGVLASLVVPNLMGNKEKADRQKAVSDIVSLESALDMYKLDNNRYP
STEQGLKALVTKPTVQPEPRNYPADGYIRRLPQDPWGTEYQLLNPGQHGKLDIFSLGPDGMPGTEDDIGNWNLDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 8e-44 64
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-44 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_029300 YP_006647586.1 general secretion pathway protein G VFG2050 Protein 2e-44 64
PCC21_029300 YP_006647586.1 general secretion pathway protein G VFG0180 Protein 1e-34 57
PCC21_029300 YP_006647586.1 general secretion pathway protein G VFG1871 Protein 1e-34 55