Gene Information

Name : PCC21_028420 (PCC21_028420)
Accession : YP_006647498.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Unknown
Product : aspartate aminotransferase, PLP-dependent - 2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3209046 - 3210260 bp
Length : 1215 bp
Strand : +
Note : -

DNA sequence :
ATGTCTCCGATTGAAAAATCCAAGAAACTGGAGAACGTATGCTATGACATCCGTGGCCCAGTCTTAAAGGAAGCCAAGCG
GCTTGAAGAAGAAGGTAATAAAGTCCTTAAACTGAACATCGGCAACCCTGCCCCTTTCGGCTTCGAGGCACCGGACGAAA
TTCTGGTTGATGTCATCCGTAACCTGCCGACCGCACAGGGCTACTGTGATTCCAAAGGCCTCTATTCCGCCCGTAAAGCC
ATCGTTCAGCATTATCAGGCGCGGGATATGCGCGATATTACGGTTGAAGACGTCTATATTGGTAACGGTGTTTCCGAACT
CATCGTGCAATCCATGCAGGCGCTGCTTAACCCGGGCGATGAAATGCTGGTTCCTGCGCCGGACTACCCGCTTTGGACCG
CCGCAGTTTCCCTGTCTAACGGCAACGCCGTTCACTATCTCTGCGATGAATCCTCCGATTGGTTCCCCGATCTGGATGAT
ATCCGCAAAAAGATCACGTCCAATACTCGCGGTATTGTCATCATTAACCCAAATAACCCAACGGGTGCGGTCTACAGCAA
AGAGCTGCTGTTGGATATCGTGGCGATTGCGCGCGAACATAACCTGATCATTTTTGCCGACGAAATCTACGACAAAATTC
TGTATGACGATGCTCAGCATCACTCGATTGCCGCACTCGCGCCGGATCTGCTGACAGTCACGTTCAACGGACTTTCCAAG
ACCTACCGCGTGGCGGGTTTCCGTCAAGGCTGGATGGTACTCAATGGCCCGAAAAAACACGCCAAAGGGTACATTGAAGG
GCTGGAAATGCTGGCCTCTATGCGTTTGTGTGCCAACGTGCCGATGCAGCATGCGATTCAGACCGCGCTGGGCGGCTATC
AGAGCATCAGCGAATTTATTCAGCCCGGCGGACGCCTGTACGAGCAGCGCAACCGTTCCTGGGAACTGATCAATCAGATC
CCCGGCGTATCGTGCGTAAAACCACGCGGCGCGCTCTATATGTTCCCACGCATTGATGCCAAGCGCTTTAATATCCACGA
CGACCAAAAACTGGTATTGGATCTCCTGTTGCAGGAAAAAGTGTTGCTGGTGCAGGGAACCGCATTTAACTGGCCTTACC
CGGACCACGTACGCATCGTCACACTGCCGCGTATTGATGAGCTGGACATGGCAATCCACAAATTAGGGCGTTTCCTGGGG
CACTATCACCAATAA

Protein sequence :
MSPIEKSKKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFEAPDEILVDVIRNLPTAQGYCDSKGLYSARKA
IVQHYQARDMRDITVEDVYIGNGVSELIVQSMQALLNPGDEMLVPAPDYPLWTAAVSLSNGNAVHYLCDESSDWFPDLDD
IRKKITSNTRGIVIINPNNPTGAVYSKELLLDIVAIAREHNLIIFADEIYDKILYDDAQHHSIAALAPDLLTVTFNGLSK
TYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPMQHAIQTALGGYQSISEFIQPGGRLYEQRNRSWELINQI
PGVSCVKPRGALYMFPRIDAKRFNIHDDQKLVLDLLLQEKVLLVQGTAFNWPYPDHVRIVTLPRIDELDMAIHKLGRFLG
HYHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-117 63
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-117 63
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-117 63
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 3e-117 63