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Name : PCC21_002740 (PCC21_002740) Accession : YP_006644930.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 309172 - 310626 bp Length : 1455 bp Strand : + Note : - DNA sequence : ATGTCAGGACAAAATTTGCAGGATCATGAACTGTTCAAAACGGGCTACTTTGCTGCGGGGAAATGGCAGCAGAGCGGCGC TACCTTTGAGGTTATGAATCCGGCGACGGGCGAGTCGATTGCCAGCGTGGCGAAAGCGGGAAAGAAAGAGACGCAGGCGG CGATTGATGCCGCGTATGCTGCCTTTCCTGCCTGGAAGCGTAAAACCGCGAAGGAACGTTCTGAAATTCTGTATCGCTGG TACGAACTGATTCTGGAAAATAAACGCTATCTGGCGGCGTTGATGACCGCCGAGCAGGGTAAGCCCGTGGAAGAAGCCGA AGGCGAAGTCGTCTACGCGGCGAATTTCATTCAGTGGTTTGCTGAGCAGGGCAAGCGGGCTAACGGTGAGATTATTCCGC CAGCTAAGCCCGGATCGAAGATTTACGCCACGCGTGAACCCGTTGGCGTCGTTGTTGCCATTACGCCGTGGAATTTCCCG CTGGCGATGCTGACGCGTAAGCTGGGGCCGGCGCTGGCCGCGGGATGTACTGGTGTCATCAAACCCGCCAACAACACGCC GCTGTCTGCGTTTGCGCTGTTGGCGCTGGCGCAGCAGGCGGGTGTGCCGGATGGCGTACTCAACGGCGTGGCGGGCGACA CGCAGGCGATCAGCGATACCGTCATGGCGAGCGATAAAGTGCGCAAAATTTCCTTCACCGGCTCGACAGAAGTAGGGAAA ACGCTGGTGCGCAATGCCGCAGAGACCATGAAGAAAGTGTCGATGGAGCTGGGCGGGAACGCGCCTTATATCGTGTTTGA TGACGCAGATATTCAGGCCGCAGTAAAAGGCGCGATAGCTAACCGTTTCCGTAACGCAGGTCAGGTTTGTGTTAGCGCCA ACCGGTTTTATATTCAGGACGGCGTCTACGATGAGTTTGTCTCTCTGCTCGCGGAAGAAGTGAAAAAGCTGAAGGTCGGT AACGGTATGGATGACGGCGTCGTGCTCGGTCCGCTGATTGATGATGCTGCGGTCGAGAAGGTGGAAAAGCACGTCAATGA CGCGGTGGAAAAGGGAGGCAAGGCGCTTGTCGGTGGTAAACGGCACAAGTTGGGCCACAGTTTCTTTGAGCCGACGGTGA TTGTTGATGCCAACGAAGCGATGCTGCTGGCGCAGGAAGAAACGTTTGGTCCGGTTGCTCCCTGCTTCCGTTTCAAAACG GAAGAAGAAGTGATTCAGAGCGCCAACAATACGCCGTTTGGGCTGGCCGCCTACTTCTACAGCCAGAGCTTGCAGCGTGT GTTCCACGTGGCAGAAGCGCTGGAGAGCGGCATGATTGGTATTAACGAATGCGCGGTTTCAACCGAATTAGCCCCCTTCG GCGGTGTGAAAGAGTCAGGATTAGGCCGCGAAGGCTCGGTTCTGGGGCTGGACGAATTTCTGGAAGTGAAAACCTGGCAT TTGGGCGGGTTGTGA Protein sequence : MSGQNLQDHELFKTGYFAAGKWQQSGATFEVMNPATGESIASVAKAGKKETQAAIDAAYAAFPAWKRKTAKERSEILYRW YELILENKRYLAALMTAEQGKPVEEAEGEVVYAANFIQWFAEQGKRANGEIIPPAKPGSKIYATREPVGVVVAITPWNFP LAMLTRKLGPALAAGCTGVIKPANNTPLSAFALLALAQQAGVPDGVLNGVAGDTQAISDTVMASDKVRKISFTGSTEVGK TLVRNAAETMKKVSMELGGNAPYIVFDDADIQAAVKGAIANRFRNAGQVCVSANRFYIQDGVYDEFVSLLAEEVKKLKVG NGMDDGVVLGPLIDDAAVEKVEKHVNDAVEKGGKALVGGKRHKLGHSFFEPTVIVDANEAMLLAQEETFGPVAPCFRFKT EEEVIQSANNTPFGLAAYFYSQSLQRVFHVAEALESGMIGINECAVSTELAPFGGVKESGLGREGSVLGLDEFLEVKTWH LGGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 8e-123 | 57 |
