Gene Information

Name : PCC21_002700 (PCC21_002700)
Accession : YP_006644926.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 304586 - 305503 bp
Length : 918 bp
Strand : -
Note : -

DNA sequence :
ATGTCGGTGTTTGCCCGCGTGGTGGAATTTGGTTCTTTTACCGCTGCTGCCCGTCAGTTACAGATGAGCGTATCCGCCGT
CAGCCAGACCGTTACCAAGCTTGAAGATGAGCTACAGATTAAGCTGCTTAATCGCAGCACACGCAGCATTGGTTTGACGG
AAGCAGGGAAAATCTATTACCACGGCTGTCGCCGCATGCTGCATGAGGCACATGAAGTCCATGAGCAGCTTTATGCCTTC
AACAACACGCCGATCGGCACGCTGCGCATCGGCAGTTCTTCTACGATGGCGCAGAATGTGTTGTCCACCATGACTGCCGC
TATGCTGAAGGAATATCCTGGTTTGTCCGTCAATCTGGTCACCGGAATTCCAGCTCCCGATCTGATTGCCGACGGGCTGG
ATATCGTTATCCGCGTCGGCGCGCTACAGGATTCCAGCCTGTTCTCGAAACGCTTAGGCTCGATGCCGATGGTGGTCTGC
GCCGCAAAAAGCTATCTGGCACAGCACGGCACGCCGGATAAACCAGCAGATATGGTGAATTTTTCCTGGCTGGAATACAG
CGTACGGCCCGACAGCGAATTCGAGCTGATCGCCCCGGAAGGCATTTCGACCCGCGTCACGCCACAAGGGCGCTTTGTCA
CTAACGACCCACAAACGCTGGTGCGTTGGCTTAAGACTGGCGCGGGTATCGCGTACGTGCCGCTCATGTGGGTCGTGGAT
GAAATTAACCGCGGTGAAATCGAGATTCTGTTTAACCGCTACCACTCCGACCCGCGCCCGGTCTACGCGCTCTACACCCG
CAAAGACAACCTGCCGCTGAAAGTACAAGTCTGCATTAACTACATGACGGAATACTTCAAAAACGTCGCCCTGACATATC
AGGGCTATCGGCAGAATCATAGCGAGGAAAAAAAGTAG

Protein sequence :
MSVFARVVEFGSFTAAARQLQMSVSAVSQTVTKLEDELQIKLLNRSTRSIGLTEAGKIYYHGCRRMLHEAHEVHEQLYAF
NNTPIGTLRIGSSSTMAQNVLSTMTAAMLKEYPGLSVNLVTGIPAPDLIADGLDIVIRVGALQDSSLFSKRLGSMPMVVC
AAKSYLAQHGTPDKPADMVNFSWLEYSVRPDSEFELIAPEGISTRVTPQGRFVTNDPQTLVRWLKTGAGIAYVPLMWVVD
EINRGEIEILFNRYHSDPRPVYALYTRKDNLPLKVQVCINYMTEYFKNVALTYQGYRQNHSEEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcaR1 CAI77370.1 putative lysR-family transcriptional regulator Not tested tc-PAIYe Protein 7e-127 83