Gene Information

Name : PCC21_025500 (PCC21_025500)
Accession : YP_006647206.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2886286 - 2887698 bp
Length : 1413 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAGACAAAAATTGTTTGTACCATCGGGCCGAAAACAGAATCGGAAGAAATGCTTGGCAACCTGCTGTCTGCTGG
CATGAATGTTATGCGCCTGAATTTCTCTCACGGGGATTACGCAGAACACGGCCAACGCATCAAGAATCTGCGTGCCGTCA
TGGAAAAAACCGGCAAGAAAGCCGCTATCCTGCTTGACACCAAAGGCCCAGAAATTCGTACCATGAAGCTGGAAAACGGC
GCTGACGTTACGCTGACCGCAGGTCAAACGTTCACGTTCACCACCGATCAAAGCATCGTGGGTAACAAAGATCGCGTCGC
AGTAACCTACGCTGGATTTACCGAAGACCTGAGCGTCGGCAACACCGTTCTGGTTGATGACGGTTTGATCGGTATGCAGG
TTACGGCAATCAACGGTAACGACGTCGTTTGTAAAGTGCTGAACAATGGCGATTTGGGCGAGAATAAAGGTGTCAACCTG
CCTGGCGTTTCCATCCAGTTGCCTGCTCTGGCTGAAAAAGACAAACGTGACCTGATTTTCGGTTGCGAACAAGGCGTCGA
TTTCGTTGCGGCATCTTTTATTCGTAAACGTTCTGACGTTGAAGAAATCCGCGCTCACCTGAAAGCACACGGTGGCGAGC
ACATCCAGATCATCTCCAAAATCGAAAACCAGGAAGGTCTGAACAATTTCGACGAAATCCTGGAAGCGTCCGACGGCATC
ATGGTTGCTCGTGGCGACCTGGGCGTTGAAATCCCGGTTGAAGAAGTGATCTTCGCACAGAAAATGATGATCGAAAAATG
TAACCTGGCACGCAAAGTGGTTATCACCGCGACGCAAATGCTGGATTCCATGATCAAAAACCCACGCCCTACCCGTGCTG
AAGCTGGCGACGTGGCGAACGCCATCATCGACGGCACCGATGCCGTTATGCTGTCTGGCGAAAGTGCGAAAGGTAAATAC
CCGCTGGAATCCGTTACCATTATGGCAACGATCTGTCAGCGTACCGACTCCGTGATGAAAAGCCGTCTGGATACCATCAA
GACGCCTCCGGTTCTGCGTATCACTGAAGCGGTCTGCCGTGGCGCAGTTGAAACTGCAGAGAAACTGGATGCGCCGCTGA
TTGTGGTTGCGACCAGCGGCGGTAAATCTGCCAAGTCTATCCGTAAATACTTCCCGAACGCCCGTATTCTGGCGCTGACG
ACGAACGACGTGACTGCACGTCAGCTGCTGCTGAGCAAAGGCATTGATACTCTGCTGGTGAAGGAAATCGCTTCTACTGA
TGATTTCTACCGTATCGGTAAAGAAGCTGCGCTGAACAGCGGTCATGCGCAAGCTGGCGATGTTGTGGTTATGGTGTCTG
GTGCACTGGTTTCCAGCGGCACAACCAACACCGCTTCCGTACACCGTCTCTAA

Protein sequence :
MKKTKIVCTIGPKTESEEMLGNLLSAGMNVMRLNFSHGDYAEHGQRIKNLRAVMEKTGKKAAILLDTKGPEIRTMKLENG
ADVTLTAGQTFTFTTDQSIVGNKDRVAVTYAGFTEDLSVGNTVLVDDGLIGMQVTAINGNDVVCKVLNNGDLGENKGVNL
PGVSIQLPALAEKDKRDLIFGCEQGVDFVAASFIRKRSDVEEIRAHLKAHGGEHIQIISKIENQEGLNNFDEILEASDGI
MVARGDLGVEIPVEEVIFAQKMMIEKCNLARKVVITATQMLDSMIKNPRPTRAEAGDVANAIIDGTDAVMLSGESAKGKY
PLESVTIMATICQRTDSVMKSRLDTIKTPPVLRITEAVCRGAVETAEKLDAPLIVVATSGGKSAKSIRKYFPNARILALT
TNDVTARQLLLSKGIDTLLVKEIASTDDFYRIGKEAALNSGHAQAGDVVVMVSGALVSSGTTNTASVHRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 0.0 87
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 0.0 87
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 0.0 87
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 0.0 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_025500 YP_006647206.1 pyruvate kinase VFG0479 Protein 0.0 87