Gene Information

Name : PCC21_000230 (PCC21_000230)
Accession : YP_006644679.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 23490 - 25601 bp
Length : 2112 bp
Strand : -
Note : -

DNA sequence :
GTGGGCCGCGATGCAATCGTCGGAGTGCTGATGAAAGGCCGCCTGCTGAACACCCAACCGCTGAGTACACTTACTGGCGT
GGGTGCAAGTCAGGCAGCGAAGCTCGCGCGGCTTGGGCTGGAAACCGTGCAGGATCTCCTCCTGCACTTACCTCTGCGCT
ACGAAGATCGCACGCATCTTTACCCAATTGGCGACCTCCTCCCCGGTATGTATGCCACCGTGGAAGGTGAAATCCTACGC
AACGATATCACCTTTGGCAGCCGTCGCATGTTGACCTGCCAAATCAGCGACGGCAGCGGCATGCTGACCATGCGCTTCTT
CAATTTCAGCGCCGCGATGAAAAACAGCCTCGCACCGGGACAACGCGTTACCGCTTATGGCGAAATCAAGCGTGGCAAAA
TCGGCGCGGAGATCATCCATCCTGAATATCGAGTTCAGGGGGATAGTACGCAGGTCGAGTTACAAGAATCGCTCACGCCG
GTTTACCCTTCCACAGAGGGCGTTCGTCAGGCCACGCTCCGCAAACTGACCGATCAGGCGCTGGCGTTGCTCGATGCCAA
CCACATCGATGAGCTGCTGCCTGAATCTCTAAGCCACTCGCTCATTAGCCTGCCGGACGCACTACGCACCTTACATCGTC
CCCCGCCGGATATGCAGCTCAGCGAGCTTGAGCACGGAAAACACCCGGCACAGCAGCGGCTGATTATGGAAGAACTGCTG
GCGCATAACCTGAGTATGCTCGCCGTGCGAGCGGGGGAACAACGGCATAAAGCCTCGCCGCTACAGGCACAAGACGGTTT
GAAGCAACAGTTGCTCGCTGCGCTGCCGTTCAAACCCACGCAGGCGCAAGAACGTGTCGTAGCCGAAATTGAAGCGGATA
TGGCGAAAAATTTCCCGATGATGCGTCTGGTGCAGGGCGATGTGGGTTCAGGAAAAACGCTGGTCGCCGCACTGGCAGCA
TTACGCGCCATTGCCAACGGCAAGCAGGTCGCACTTATGGCACCCACAGAGCTATTGGCCGAACAACATGCCCATAATTT
CCGCCAGTGGTTTGAACCACTAGGGCTTGAAGTCGGCTGGCTGGCTGGCAAACAAAAAGGGAAAGCACGTCAGGCGCAGC
AGGATGCCATCGCCAGTGGTCAGGTTTCCATGGTTGTCGGGACGCACGCTATTTTCCAGCAGCAGGTACAATTCAACGGG
CTGGCATTGGTCATTATCGATGAACAGCACCGCTTTGGCGTGCATCAACGCCTTGCGCTGTGGGAAAAAGGCGAAGAACA
GGGCTTTCATGCCCATCAATTAATCATGACCGCGACACCGATTCCCCGCACGCTGGCGATGACGGCCTATGCCGATCTGG
ATACGTCCGTCATTGACGAGCTGCCGCCGGGCAGAACCCCCGTCACCACCGTCGCCATACCCGATTCACGCCGCAGCGAC
ATTATCGAACGCGTGAATAATGCCTGTCAGCAGGAAGGGCGGCAGGCCTATTGGGTATGTACGCTGATCGAAGAATCCGA
CCTGCTGGAAGCGCAGGCAGCAGAAGCCACCAGCGAAGAGCTGAAGGCTGCCCTGCCGAATCTCAAGGTTGGATTGGTTC
ACGGCCGCATGAAAGCGCAGGAAAAGCAGGCGGTGATGCAAGCTTTCAAACAGGGCGAACTGCAACTGCTGGTAGCGACC
ACCGTCATCGAGGTAGGTGTGGATGTACCGAATGCCAGCCTGATGATCATTGAGAACCCTGAGCGTCTGGGCTTAGCGCA
ACTGCACCAGTTGCGCGGGCGCGTCGGACGCGGTGCGGTGGCATCTCACTGCGTGCTGCTCTACAAAACGCCAATGAGCA
AGACTGCACAAAAACGGCTCCAGGTTCTACGCGATAGCAACGATGGCTTTGTTATCGCACAGCGCGATCTGGAAATTCGT
GGGCCGGGAGAATTACTCGGTACGCGCCAGACGGGTAATGCCGAGTTTAAAGTCGCGGACCTCCTGCGCGATCAGGACCT
GATTCCACAGGTACAGCGCGTTGCTCGCCACCTGCACGAACACTATCCCGAGCATGCCGTTGCACTAATCGAACGCTGGC
TACCCGAGCGCGCACGCTACACCAACGCCTGA

Protein sequence :
MGRDAIVGVLMKGRLLNTQPLSTLTGVGASQAAKLARLGLETVQDLLLHLPLRYEDRTHLYPIGDLLPGMYATVEGEILR
NDITFGSRRMLTCQISDGSGMLTMRFFNFSAAMKNSLAPGQRVTAYGEIKRGKIGAEIIHPEYRVQGDSTQVELQESLTP
VYPSTEGVRQATLRKLTDQALALLDANHIDELLPESLSHSLISLPDALRTLHRPPPDMQLSELEHGKHPAQQRLIMEELL
AHNLSMLAVRAGEQRHKASPLQAQDGLKQQLLAALPFKPTQAQERVVAEIEADMAKNFPMMRLVQGDVGSGKTLVAALAA
LRAIANGKQVALMAPTELLAEQHAHNFRQWFEPLGLEVGWLAGKQKGKARQAQQDAIASGQVSMVVGTHAIFQQQVQFNG
LALVIIDEQHRFGVHQRLALWEKGEEQGFHAHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDSRRSD
IIERVNNACQQEGRQAYWVCTLIEESDLLEAQAAEATSEELKAALPNLKVGLVHGRMKAQEKQAVMQAFKQGELQLLVAT
TVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPMSKTAQKRLQVLRDSNDGFVIAQRDLEIR
GPGELLGTRQTGNAEFKVADLLRDQDLIPQVQRVARHLHEHYPEHAVALIERWLPERARYTNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 6e-98 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_000230 YP_006644679.1 ATP-dependent DNA helicase BAC0356 Protein 0.0 60