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Name : PCC21_022940 (PCC21_022940) Accession : YP_006646950.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Virulence Product : type III secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 2608570 - 2609649 bp Length : 1080 bp Strand : + Note : - DNA sequence : ATGAGCGAGAAAACGGAAGAACCCACAGAGAAAAAGCTCGAAGACGCGCGCCGTAAAGGGGAAGTCGGGCAAAGTCAGGA TGTGCCCAAGCTGCTGATCTGCGTCGGTCTGCTGGAGTGCGTACTGGCGCTGGCGGACAGCACGATGGGGAAATTGCAAA CGCTGGTGCAACTGCCGCTGCAACGGCTGGATGCCCCGTTTGCGCAAGTGGCGAAAGAGGTGTTCCACGATGCCGCCGTA CTGGCGGGCACGCTCTGCCTGTTAGCAGCCGCGATTGCCGTGCTGCTGCGCGTGGTCGGCGGCTGGCTCCAGTATGGCCC GCTGTTTGCCCCCGAAGCGCTGAACCTCGATCTCAACCGCCTGAACCCGATCAACCAGTTCAAGCAGATGTTTTCGATGC GCAAGCTGGTAGAAATGCTGACCAATATCCTGAAAGCCGTGGTGATCGGAACGGTCTTTTACAAAGTGGTGGTGCCGGAG CTGGAGGCGCTGGTCGAATTGGCCTATGGCGATCTACACGGCTTCTGGCAAGGGGTTAAAGCGCTGCTGATGCGCGTTGC CCGCACCACGTTGACGGCACTGCTGGTACTGTCCGCACTGGATTTCGGTCTGCAAAAGTATTTCTTTCTCAAGCAGCAGC GCATGAGCCACGAGGATTTACGCAACGAGCACAAGGATTCCGAAGGCGATCCGCATATGAAAGGCCATCGTAAATCGCTG GCGCATGAACTGATGAACGAACCTGCCGCGCCGCGCCCCAAAGCCAAGGTCGAAGACGCCGATATGCTGCTGGTTAACCC GACGCACTATGCGGTGGGGCTTTACTATCGCCCCGGTAAAACGCCGCTGCCGCGCATTTTATTCAAGGGGGAAGACCGCG CGGCGCAGGAACTTATTGCGCAGGCGCAAAAAGCAGATATTCCGGTGATTCGCTTTATCTGGCTGACCCGCACGCTGTAT CGCACCACGCCGGAAGGCCACTACATTCCGCGCGAAACGCTTCAGGCCGTGGCGCAGGTGTATCGCGTCCTACGCCAGCT CGAAGACGAGCAAAAACGCGACATTATTGAGATGGAGTAA Protein sequence : MSEKTEEPTEKKLEDARRKGEVGQSQDVPKLLICVGLLECVLALADSTMGKLQTLVQLPLQRLDAPFAQVAKEVFHDAAV LAGTLCLLAAAIAVLLRVVGGWLQYGPLFAPEALNLDLNRLNPINQFKQMFSMRKLVEMLTNILKAVVIGTVFYKVVVPE LEALVELAYGDLHGFWQGVKALLMRVARTTLTALLVLSALDFGLQKYFFLKQQRMSHEDLRNEHKDSEGDPHMKGHRKSL AHELMNEPAAPRPKAKVEDADMLLVNPTHYAVGLYYRPGKTPLPRILFKGEDRAAQELIAQAQKADIPVIRFIWLTRTLY RTTPEGHYIPRETLQAVAQVYRVLRQLEDEQKRDIIEME |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | AAB06008.1 | HrcU | Virulence | Hrp PAI | Protein | 7e-99 | 68 |
| hrcU | AAT96306.1 | HrcU | Virulence | S-PAI | Protein | 2e-78 | 56 |
| hrcU | AAT96265.1 | HrcU | Virulence | S-PAI | Protein | 2e-78 | 56 |
| hrcU | AAT96346.1 | HrcU | Virulence | S-PAI | Protein | 6e-76 | 56 |
| hrcU | ABA47282.1 | HrcU | Virulence | S-PAI | Protein | 8e-78 | 56 |
| hrcU | ABQ88362.1 | HrcU | Virulence | Hrp PAI | Protein | 9e-66 | 51 |
| hrpY | AAB05078.1 | HrpY | Virulence | Hrp PAI | Protein | 9e-66 | 51 |
| hrcU | AAG33887.1 | HrcU | Virulence | Hrp PAI | Protein | 3e-55 | 50 |
| hrcU | AAT96149.1 | HrcU | Virulence | T-PAI | Protein | 2e-67 | 50 |
| hrcU | AAT96203.1 | HrcU | Virulence | T-PAI | Protein | 2e-67 | 50 |
| hrcU | NP_791219.1 | type III secretion protein HrcU | Virulence | Hrp PAI | Protein | 4e-63 | 50 |
| hrcU | AAC35808.1 | hrp type III pathway protein | Virulence | Hrp PAI | Protein | 3e-57 | 49 |
