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Name : PCC21_022840 (PCC21_022840) Accession : YP_006646940.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Virulence Product : protein HrcV Function : - COG functional category : - COG ID : - EC number : - Position : 2600292 - 2602394 bp Length : 2103 bp Strand : + Note : - DNA sequence : ATGAATCTGTTGATTATCTGGCTGAACCGCATTGCGCTGAGCGCGATGCAGCGCTCGGAAGTCGTTGGCGCGGTCATCGT GATGTCCATCGTCTTCATGATGATCATTCCGCTGCCCACCGGGCTGATCGATGTGCTGATCGCGCTCAATATCTGCGTCT CTTCCCTGCTGATCGTGCTGGCAATGTACCTGCCCAAACCGTTGGCCTTCTCGACGTTTCCGGCGGTGCTGCTGCTGACC ACCATGTTTCGGCTGGCCATCTCCATTTCCACCACGCGTCAGATTCTGCTCCAGCAGGACGGCGGCCATATCGTTGAGGC CTTCGGTAACTACGTGGTGGGCGGGAATCTGGCGGTCGGTCTGGTTATTTTCCTGATTCTGACGGTGGTGAACTTTCTGG TGATCACCAAAGGATCCGAACGCGTGGCCGAGGTGGCGGCACGCTTCACGCTCGATGCGATGCCCGGTAAACAGATGTCC ATCGACAGCGATCTGCGTGCCGGATTAATCGAAGCCCATCAGGCACGGCAGCGGCGGGAAAATCTGGCGAAAGAAAGTCA GCTGTTCGGGGCGATGGACGGCGCGATGAAGTTCGTTAAAGGCGACGCCATTGCGTCGCTGGTGATCGTGTTCATCAACA TGATCGGCGGTTTCGCCATCGGCGTGTTGCAGCACAACATGGCCGCGTCCGATGCGATGCACGTCTACTCGGTATTGACC ATCGGCGACGGGCTGATCGCCCAGATTCCAGCTCTGCTTATCTCGCTGACCGCCGGGATGATCATCACCCGCGTCTCGGC CGACGGGCAAAAAGTGGATGCCAATATTGGCCGCGAAATTGCCGAACAGCTTACCAGCCAGCCCAAAGCGTGGATCATCT CCTCCATCGGTATGTTCGGTTTTGCGCTGCTGCCGGGGATGCCGACGCTGGTGTTTGTCACCATCAGTCTGGCGTCGCTC GGCAGCGGTCTGTTCCAGCTCTGGCGCATCAAGCAGCAGGGGCAGTTGGATGCCAGCCAGTCGGAGGCGGACAACATACC CGCCGAACAGAACGGCTATCAGGATCTGCGGCGCTTCAACCCCACACGCGCCTATTTGCTGCTGTTTCATCCGGTCTGGC AAGAGCAGCCAACGGCAACGGCGCTGGTGCAGAATATTCGCCGCCTGCGTAACAAACTGGTCTACCGCTTCGGCTTTACG CTGCCGTCCTTTGATATCGAATTCAGCGATCGGCTAGCGGAAGATGAATTTCAGTTTTGCGTCTACGAAATCCCCTACGT GAAAGCCACGTTTGTCACCGATCGGCTGGCCATCGCCAGCGGTGCCATCGAACCGACGGATGCCAACCTCGCCACGCCCG GCCCGACGCTGCGGGATGAAAGCCACTGGCTCTGGTTGCCGCTCGCACAGGTCGCGCAGCAGCCGGACGACGTGCCGCGC TGGAGCGCGGATGAGCTGATTCTGGCGCGCATGGAACAGGCTATCCACCGCACCGGCTCACAATTCATTGGTTTGCAGGA AACCAAATCCATTCTGGCCTGGCTGGAGAGCGAGCAGCCGGAATTGGCGCAGGAGCTTCAGCGCATCATGCCGCTTTCGC GTTTTGCCAGCGTGCTGCAACGCCTGGCTTCCGAACGCGTGCCGCTGCGATCGGTGCGCCCCATCGCCGAAGCGCTGATT GAAGTCGGCCAGCACGAACGCGACACGCTGGCGCTGACCGACTACGTGCGTCTGGCGCTTAAATCGCAAATCTGCCACCA GTACAGCGACGAAAACAACCTTGCCGTCTGGCTGCTGACGCCAGAAAGCGAAGAGCTGCTGCGCGATGCGCTGCGCCAGA CGCAGAACGAAACCTTCTTCGCCCTGACGCAGGACTACGCCTCCACGCTGCTCGGTCAACTGCGGCAGGCATTTCCGCCG CTCTCGTCGCAGCGCAGTCTGGTGCTGGTCGCACAGGATTTACGCAGCCCGCTGCGCACGCTGTTGCAGGACGAATTTCA CCACGTTCCGGTGCTGTCCTTCACAGAGCTGGAATCCACCCTGTCGATCAACGTCATTGGACGTCTCGATCTTTACGACT CCCCCGACCCCTTTAGCGCATAG Protein sequence : MNLLIIWLNRIALSAMQRSEVVGAVIVMSIVFMMIIPLPTGLIDVLIALNICVSSLLIVLAMYLPKPLAFSTFPAVLLLT TMFRLAISISTTRQILLQQDGGHIVEAFGNYVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVAARFTLDAMPGKQMS IDSDLRAGLIEAHQARQRRENLAKESQLFGAMDGAMKFVKGDAIASLVIVFINMIGGFAIGVLQHNMAASDAMHVYSVLT IGDGLIAQIPALLISLTAGMIITRVSADGQKVDANIGREIAEQLTSQPKAWIISSIGMFGFALLPGMPTLVFVTISLASL GSGLFQLWRIKQQGQLDASQSEADNIPAEQNGYQDLRRFNPTRAYLLLFHPVWQEQPTATALVQNIRRLRNKLVYRFGFT LPSFDIEFSDRLAEDEFQFCVYEIPYVKATFVTDRLAIASGAIEPTDANLATPGPTLRDESHWLWLPLAQVAQQPDDVPR WSADELILARMEQAIHRTGSQFIGLQETKSILAWLESEQPELAQELQRIMPLSRFASVLQRLASERVPLRSVRPIAEALI EVGQHERDTLALTDYVRLALKSQICHQYSDENNLAVWLLTPESEELLRDALRQTQNETFFALTQDYASTLLGQLRQAFPP LSSQRSLVLVAQDLRSPLRTLLQDEFHHVPVLSFTELESTLSINVIGRLDLYDSPDPFSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | AAB05999.2 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 78 |
| hrcV | AAT96297.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 69 |
| hrcV | AAT96256.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 69 |
| hrcV | ABA47273.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 69 |
| hrcV | AAT96337.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 69 |
| hrcV | ABQ88352.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 65 |
| hrpI | AAA03015.1 | HrpI | Virulence | Hrp PAI | Protein | 0.0 | 65 |
| hrcV | NP_791229.1 | type III secretion protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 65 |
| hrcV | AAG33877.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 65 |
| hrcV | AAT96139.1 | HrcV | Virulence | T-PAI | Protein | 0.0 | 64 |
| hrcV | AAT96193.1 | HrcV | Virulence | T-PAI | Protein | 0.0 | 64 |
| hrcV | AAR25631.1 | type III secretion protein HrcV | Not tested | Not named | Protein | 0.0 | 64 |
| invA | AAS66860.1 | InvA | Not tested | SSR-2 | Protein | 2e-103 | 42 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 1e-103 | 41 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 8e-124 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PCC21_022840 | YP_006646940.1 | protein HrcV | VFG0064 | Protein | 1e-129 | 44 |
| PCC21_022840 | YP_006646940.1 | protein HrcV | VFG0384 | Protein | 2e-121 | 41 |
| PCC21_022840 | YP_006646940.1 | protein HrcV | VFG0198 | Protein | 3e-113 | 41 |
