Gene Information

Name : PCC21_021960 (PCC21_021960)
Accession : YP_006646852.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2483431 - 2484180 bp
Length : 750 bp
Strand : +
Note : -

DNA sequence : 
ATGTTATTAAAGAATAAAGTCGCTGTTATTACAGGGGCAGCCTCCCCACGTGGTTTGGGCTTCGCTACCGCAAAATTATT
TGCAGAGAATGGTGCCCATGTTGTCATTATTGACCTCGATGAAGCGGCAAGTGAAAAAGCAGCAGCGTCCCTTGGCGACA
AACATTTAGGTTTGAAAGCTAACGTGTCTGATGAGCAACAGGTACATGCAGCGATTGAACAAATCATTGCTAAGTTTGGG
CGTATAGACGTTTTAGTAAACAACGCTGGCATTACACAGCCAATTAAGACGCTCGATATTAAGCGTGACAATTATGATGC
GGTTTTAGATGTTAGCCTGCGTGGCACTTTATTGATGTCACAGGCCGTGATCCCTGTTATGCGGGCACAAAATAAAGGCA
GCATCGTTTGTATTTCTTCCGTCTCGGCACAACGTGGCGGTGGCATTTTTGGCGGTCCACACTACAGCGCAGCAAAAGCA
GGCGTTCTTGGCCTGGCTAAAGCGATGGCTCGTGAGTTCGGGCCTGATAATATTCGCGTGAACGCCATCACCCCCGGCCT
GATTCAAACGGATATTACTGCCGGGAAATTAACCGATGAAATGAAAACCTCTATTCTGGCCGGGATTCCGCTTAACCGAC
TCGGCGACGCGATTGATATTGCACAGGCCACATTATTCCTGGCAAGCGATCTTTCCTCCTATTCCACCGGTATTACGCTT
GATGTCAATGGCGGCATGCTCATCCATTAA

Protein sequence : 
MLLKNKVAVITGAASPRGLGFATAKLFAENGAHVVIIDLDEAASEKAAASLGDKHLGLKANVSDEQQVHAAIEQIIAKFG
RIDVLVNNAGITQPIKTLDIKRDNYDAVLDVSLRGTLLMSQAVIPVMRAQNKGSIVCISSVSAQRGGGIFGGPHYSAAKA
GVLGLAKAMAREFGPDNIRVNAITPGLIQTDITAGKLTDEMKTSILAGIPLNRLGDAIDIAQATLFLASDLSSYSTGITL
DVNGGMLIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 9e-80 76
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 5e-78 76
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 5e-78 76
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-78 76
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 5e-78 75