Gene Information

Name : PCC21_021730 (PCC21_021730)
Accession : YP_006646829.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2459313 - 2459510 bp
Length : 198 bp
Strand : -
Note : -

DNA sequence :
ATGAATAACAACCAACGCATTCTCCGTAAAAAAGAAGTCCTGAGCCGTACAGGTATCTCTAATGCCACCCTTTACCGACT
CATCGCGAAAGAATTGTTTCCAGCACAGAGAAAATTGACTGGCGCTGAAGGTCGCGCTGTCGGATGGCTTGATTCAGATA
TCAACGACTGGATCAGCAGCCGCGGGCAGACGCTGTAA

Protein sequence :
MNNNQRILRKKEVLSRTGISNATLYRLIAKELFPAQRKLTGAEGRAVGWLDSDINDWISSRGQTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 1e-06 44
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 2e-09 44
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 2e-09 44
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 1e-09 44
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 9e-06 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_021730 YP_006646829.1 transcriptional regulator VFG1141 Protein 6e-10 44