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Name : PCC21_020150 (PCC21_020150) Accession : YP_006646671.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Virulence Product : sugar-specific permease SgaT/UlaA Function : - COG functional category : - COG ID : - EC number : - Position : 2271014 - 2272351 bp Length : 1338 bp Strand : - Note : - DNA sequence : ATGAACACCGTTATCAATTTCATTGTGAAAGATTTATTAGGCCAGGCATCCATATTAATCGCGCTGATCGCCATGATCGG GTTGATTCTGCAGAAGAAATCAGTAGGAAAAATTGCAGAGGGAACCTTCAAGACGCTGCTGGGTTTCCTCATCATGATGG CAGGGATTAACATCATCGTTGATACCCTGACTTATTTGAACAACATATTTACCCAAGGCTTTGGCATGAAAGGCTACATC ACCGATGTCGCCGCCATCGCCGGGTTGGCAAACCGCGAACTTGGGTCAGAAGTCGCGTTGACGCTCATGGTGATCTTTGC CGTTAACATCCTTATTGCACGCATTACTCCCTTTAAATATATCTTCCTAACGGGACAGGCTCTGCTGTGGATGGCAACCA TCGGCACCGTGATCGGCTATAAATCAGGCTTGACCGGCGCGACACTGATCTTAACCGGAGGCATATTTGGCGGCATTATG GCCGTGCTGATGCCCGCGCTGGCGCAGCCGATTGTCCGTAAAATCACGAATTCCGATGATGTTGCACTGGGGCATTTTTG TACCATCGGGTATCTGGTGCAGGCCGCCGTCGCGCGGTTAGTCGGTAAAAATTCCAAATCCACGGAAGATTTAACGCTGC CTGATAATTTCAAATTCTTGCAGGATACCTACCTGTCGATGGCCGTGGTCATGGTGCCGATGTACCTCATCCCTGCCGTG GCGGCGGGACCGACCTACATCGCGCAGTACGCGAACGGCGTCAATTATCTGATGTATTCCTTCATGCAGTCCATGCAGTT TGTCGCAGGCGTTTTCGTTCTCTACAGCGGTGTCCGTCTGCTGCTTAATGAGCTGGTTCCCGCATTTCGAGGTATCGCCA TGCGGCTGGTTCCTAACGCCAAACCCGCGTTGGATTGCCCGGTGCTCTTCCCCTATGCGCCCAACGCCGTGATTGTTGGC TTCCTCGCCACCACCGTCGGTTCCATTCTGGGAATGCTGATCTTCCCGATGTTTGGACTAGCGATGATTTTGCCAGGTTT ATTGACCAACTTCTTTGCGGGCGGGACAGCGGGTATTTTCGGTAACGCCATGGGAGGACGGCGTGGCGCAGTCATCGGCG GCGTGGTTCATGGTCTTTTTATTACGCTCTTGCCCGCTATTCTGGTGCCATTACTGGAAGTCTTCGGATTTACTGGCGTC ACCTTCAGTGATTCCGATGTCATCGGCACTGGCCTGATATTAGGACATGCCTTCCAGCAAGATTGGTTATTTGTCGCCGC CTTTGTCGCGTTCGTTGCCTTCATTGCCTTTATTGCGAATCGTAAACTATCGCAATAG Protein sequence : MNTVINFIVKDLLGQASILIALIAMIGLILQKKSVGKIAEGTFKTLLGFLIMMAGINIIVDTLTYLNNIFTQGFGMKGYI TDVAAIAGLANRELGSEVALTLMVIFAVNILIARITPFKYIFLTGQALLWMATIGTVIGYKSGLTGATLILTGGIFGGIM AVLMPALAQPIVRKITNSDDVALGHFCTIGYLVQAAVARLVGKNSKSTEDLTLPDNFKFLQDTYLSMAVVMVPMYLIPAV AAGPTYIAQYANGVNYLMYSFMQSMQFVAGVFVLYSGVRLLLNELVPAFRGIAMRLVPNAKPALDCPVLFPYAPNAVIVG FLATTVGSILGMLIFPMFGLAMILPGLLTNFFAGGTAGIFGNAMGGRRGAVIGGVVHGLFITLLPAILVPLLEVFGFTGV TFSDSDVIGTGLILGHAFQQDWLFVAAFVAFVAFIAFIANRKLSQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 3e-66 | 44 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 3e-66 | 44 |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 3e-66 | 44 |
