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Name : PCC21_017790 (PCC21_017790) Accession : YP_006646435.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : - Position : 2010446 - 2011198 bp Length : 753 bp Strand : + Note : - DNA sequence : ATGACCTTTACTGTGATCATTCCTGCGCGTTTTGCGTCAAGCCGACTGCCGGGTAAACCGCTGGCGGACATCAACGGCAA ACCAATGGTCGTCCATGTGATGGAACGGGCGCTGGAATCGGGGGCACAGCGCGTTATTGTGGCCACCGATCATCCCGACG TCGAGGCGGCCGTGCAGCAAGCGGGCGGTGAAGTATGCCTGACCCGCGCCGATCATAATTCTGGTACAGAGCGCCTGGCT GAAGTCATCGAACGTTACGGTTTTACCGATGATGACATCATCGTAAACGTTCAGGGCGATGAACCGCTCATTCCTTCGGT TATCATTCGTCAGGTGGCGGAAAACCTCGCTGCCAGTAAAGCAGGAATGGCGACACTGGCGGTGCCGATTGAAACCAGCG AAGAAGCATTCAATCCGAATGCGGTAAAAGTCGTTACCGACGCTGAAGGATACGCGCTGTATTTTTCCCGTGCGACTATT CCCTGGGACAGAGAGCGTTTTGCTCAGTCTAAGGAAACCATAGGCGATCACTTCCTGCGCCATATCGGCATTTATGCTTA CCGTGCGGGCTTTGTGCGTCGTTATGTCAGTTGGGCACCGAGCCAGCTGGAGCAAATCGAATTACTGGAGCAACTGCGCG TGCTGTGGTACGGCGAGAAGATTCACGTTGCGGTCGCCAAAGCCATTCCTAGCGTCGGCGTGGATACCCCAGAAGATCTG GCCCGTGTGCGGCAGGTCATGGCGAGTCAGTAA Protein sequence : MTFTVIIPARFASSRLPGKPLADINGKPMVVHVMERALESGAQRVIVATDHPDVEAAVQQAGGEVCLTRADHNSGTERLA EVIERYGFTDDDIIVNVQGDEPLIPSVIIRQVAENLAASKAGMATLAVPIETSEEAFNPNAVKVVTDAEGYALYFSRATI PWDRERFAQSKETIGDHFLRHIGIYAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAIPSVGVDTPEDL ARVRQVMASQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-34 | 45 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-34 | 45 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 6e-35 | 45 |
