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Name : PCC21_016470 (PCC21_016470) Accession : YP_006646303.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 1858281 - 1859897 bp Length : 1617 bp Strand : - Note : - DNA sequence : ATGTCCAGTTCACCTATATTGCAGATAGATAATCTCAGCATTGCCTTCCGCAAAGGCGATCAGGAGCAGCGCGTTGTCGA TCAGCTTTCACTGGCGGTGAACACGGGTGAAACGCTGGCGCTGGTCGGTGAGTCAGGCTCGGGAAAAAGCGTCACCGCGC TGTCGGTTTTGCGTTTGCTCCCCTCCCCGCCCGTGGTTTATCCGCAAGGGGATATCCGCTTCGCAGGGCAGTCGCTGCTG CATGCTGATGAAAAAACACTGCGTCAGATACGCGGCAATCGGATCGCGATGATCTTTCAGGAACCGATGGTGTCGCTTAA CCCTTTGCAAAGCATTGAGAAACAGCTGATTGAAGTGCTTTCGCTCCACCGTGGCATGCGCACCGAAGCAGCCCGCAGCG AAGTCATCACCTGTCTGGATCGCGTGGGTATTCGGCAGGCTAAGAGTCGATTGAATGATTTCCCGCACCAGCTTTCCGGC GGGGAACGCCAGCGCGTCATGATTGCGATGGCGCTGCTGACACAGCCGGATTTACTGATTGCCGATGAACCCACAACGGC ATTGGACGTGACCGTCCAAGCGCAAATATTGAAATTGCTGAACGAGCTGAAGCAGGAACTGGGGATGAGTTTACTGTTCA TCACCCATAACCTGAATATTGTCCGCCAGTTGGCAGATAACGTGTCGGTCATGAAAGCCGGTCAGGCCGTGGAACATAAT AGCTGTCAGCAACTTTTCAGCGTACCGCAGCATCCCTACACGCGCCAATTGCTGGATGCCGAGCCGTCAGGCGAGCCGCT CCCGGTAACAGATGATGGCGAACCTCTTTTGCGGGTGGAAAAACTGCACGTTTCGTTTCCCATCAAACGCGGCCTTTTGC GCCGTACTGTTGACGAAAAGAAGGTAGTGAACAATATCAACTTCACCTTACGGCGCGGCGAAAGTCTGGGTCTGGTGGGG GAATCCGGCTCAGGAAAAAGCACGACCGGACTCGCGCTGCTGCGCCTGATTCAATCACGTGGTGATATCTGGTTTGACGG CCAGCCTCTGCAAGGGCTAACCCGTAAGCAAATGCTGCCTTTCCGTCATCGGATTCAGGTTGTCTTTCAGGATCCGAACT CCGCGCTGAACCCGCGACTGAATGTAGAGCAAATTATTGCTGAGGGGTTGACCGTCCATCATAAGTTGAGCAAAGAAGCG CTCGACCAGCGTGTGGTTGAGGCGATGCAGGAAGTTGGGCTGGATCCGACGACCCGCTACCGCTATCCCTCCGAGTTTTC CGGTGGTCAGCGCCAGCGTATCGCTATCGCTCGCGCCCTGATACTGCAACCGGAGCTGCTGATCCTTGATGAACCCACCT CATCGCTGGACAGAACGGTGCAGGCGCAAATTCTGACGCTACTGAAATCATTACAGGAAAAGCACAAAATCGCCTACCTG TTTATCAGCCATGACTTACAGGTTATCCGTTCGCTGTGCCATCAGGTTATTGTGTTGCGACAAGGTGAAGTGGTCGAACA GGGCGAATGCAAACAGGTATTTGCGCACCCTGCCGAACATTACACGCGTGAACTGCTACAGTTTTCATCCTATACGGCGG AAACGCAGTCAGCATAA Protein sequence : MSSSPILQIDNLSIAFRKGDQEQRVVDQLSLAVNTGETLALVGESGSGKSVTALSVLRLLPSPPVVYPQGDIRFAGQSLL HADEKTLRQIRGNRIAMIFQEPMVSLNPLQSIEKQLIEVLSLHRGMRTEAARSEVITCLDRVGIRQAKSRLNDFPHQLSG GERQRVMIAMALLTQPDLLIADEPTTALDVTVQAQILKLLNELKQELGMSLLFITHNLNIVRQLADNVSVMKAGQAVEHN SCQQLFSVPQHPYTRQLLDAEPSGEPLPVTDDGEPLLRVEKLHVSFPIKRGLLRRTVDEKKVVNNINFTLRRGESLGLVG ESGSGKSTTGLALLRLIQSRGDIWFDGQPLQGLTRKQMLPFRHRIQVVFQDPNSALNPRLNVEQIIAEGLTVHHKLSKEA LDQRVVEAMQEVGLDPTTRYRYPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILTLLKSLQEKHKIAYL FISHDLQVIRSLCHQVIVLRQGEVVEQGECKQVFAHPAEHYTRELLQFSSYTAETQSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-77 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-77 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-77 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-77 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-85 | 41 |
