|
Name : PCC21_014980 (PCC21_014980) Accession : YP_006646154.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Virulence Product : pathogenicity island protein Function : - COG functional category : - COG ID : - EC number : - Position : 1716434 - 1717393 bp Length : 960 bp Strand : + Note : - DNA sequence : ATGACTATTCAACCCGTCATTGGGATCAGCGGATGTTTAACTGGCTCGGCCGTACGGTTTGACGGCGGGCATAAACGCAT GAACTTTGTCATGGATGAGCTGGCGCAGTGGGTGACCTTCAAACCCGTCTGCCCGGAGATGTCCATCGGCCTGCCCGTGC CCCGTCCGGCTCTGCGTCTGGTACAGACGGCCGAAGGCGACATCCGCATGCGCTTCAGCCATGCCCCACACGATGATGTA ACGGAGAAAATGGCCGACTTCGCTGAGACTTACCTCTCACGTTTGGAGCAACTGTCGGGCTTTATCGTTTGTGCCAAATC GCCGAGCTGCGGTATGGAACGCGTGCGGCTGTATGACGGAAAAGGCAATCGCGGGCGTAAAGAGGGAGTTGGTCTTTTTA CCGCTTCACTACTGGAGAAATACCCGTGGTTACCGGTTGAAGAAGATGGTCGCCTGCACGATCCGGTGCTGCGGGAGAAC TTTGTCGAGCGTGTTTTCGCCCTGCATGAGTTGAACACTCTGCGTGCCAACGGCCTCACGCGCCGCGCGCTGCTGGACTT CCACAGCCGCTATAAACTTCAACTGCTGGCACACCACCAGGCGGGCTACCGTGAGATCGGGCCGTTTGTCGCGTCGCTGC ATGAATGGGAAAACCTGGATGATTTCTTTGTGGCCTATCGCGAAAAACTAATGACAATCCTGAAGAAACCCGCTTCGCGG AAAAATCACACCAACGTGCTAATGCATATTCAGGGTTATTTCCGTAATCAGTTGACCCTCCGCCAGCGTGGTGAACTGCG CGAGGTGATCCTGCACTATCGCGATGGACTGTTGCCCATCCTCGCCCCACTTACGCTGCTGAAGCACTATCTGGCCGAAT ACCCTGACCGCTATCTGCTAACTCAAAATTACTTTGACCCTTATCCGCAGAGTTTGGGTCTTCGCCTCCCGGTTCACTGA Protein sequence : MTIQPVIGISGCLTGSAVRFDGGHKRMNFVMDELAQWVTFKPVCPEMSIGLPVPRPALRLVQTAEGDIRMRFSHAPHDDV TEKMADFAETYLSRLEQLSGFIVCAKSPSCGMERVRLYDGKGNRGRKEGVGLFTASLLEKYPWLPVEEDGRLHDPVLREN FVERVFALHELNTLRANGLTRRALLDFHSRYKLQLLAHHQAGYREIGPFVASLHEWENLDDFFVAYREKLMTILKKPASR KNHTNVLMHIQGYFRNQLTLRQRGELREVILHYRDGLLPILAPLTLLKHYLAEYPDRYLLTQNYFDPYPQSLGLRLPVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| t1257 | NP_805060.1 | pathogenicity island protein | Not tested | SPI-2 | Protein | 2e-125 | 78 |
| STY1731 | NP_456139.1 | putative pathogenicity island protein | Not tested | SPI-2 | Protein | 2e-125 | 78 |
| ORF 319 | CAB37410.1 | - | Not tested | SPI-2 | Protein | 2e-125 | 77 |
| SC1410 | YP_216397.1 | inner membrane protein | Not tested | SPI-2 | Protein | 5e-125 | 77 |
| orf319 | NP_460354.1 | inner membrane protein | Not tested | SPI-2 | Protein | 3e-125 | 77 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PCC21_014980 | YP_006646154.1 | pathogenicity island protein | VFG0490 | Protein | 1e-125 | 77 |
