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Name : PCC21_014580 (PCC21_014580) Accession : YP_006646114.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : - COG ID : - EC number : - Position : 1677689 - 1679461 bp Length : 1773 bp Strand : + Note : - DNA sequence : ATGAACAAAAACCATACCGTCATAACGACGCAGTTATCCGCATGGTGGCACACGTATCGTCAGCTGGAGCGGGTGACGGG TTCACAATCTCGACTGTTCCGTCGGTGTTGCGTAAGCCTGCTGGCAGCGGCTGTTGCGCAGGGGTTAGCGCTGGCGTGCC TGTTTCCGCTGCTGTCGGCGTTCACCCACGCGGCGGCTTCCCGCGAGATAGCGATGTGGCTGCTACTGATGACATTTCTT AGCCTGTTGACGCTGGCGCTGCGTTGGTATGGTCAAGGATTTGAATATCGCGGGCAGCTTGCGGCGGCAACCCATGAACT GCGTATGCGTCTGGGAGAACAGTTGCGGAGTATGCCGCTAACCACGCTCCAGTCCGCGCGGGCGGGGGATATCAACGCGC TGCTGCTGGGCAGCGTGGATGAGAACCTGAACTATATGCTGGCGATAGTAAACCAGCTGCTGCTGGCTATCGTGACGCCC CTCGTGATAGCGCTCGTCATGCTGATGGTGGAGTGGCGATTGGGTGTGAGTTTACTGCTGATCTTTCCCGCTATCGCGCT GCTTTATCGCTGGCGGCGACCGGCATTTGCGCACACGATGCAGGCGCTGGCGGAGGCGAATCAGCAAACCAGCGCCGATA TTGTGGAATATGTGCAGGGGCTCGCCGTCCTGAGAACCAGCTGTCAGCAGGCTGAACGTACATCGGCGCTGCGTAAGCGT TTTCAGCATCTACAGCAGATACAAACGTCGGCTCACCGCAGCGGTGCCAAACCCGGTGCGGTGGTTGCCAGCGTCGTGGA GTTAGGTCTTCAGGGCGTACTGATTCTGGGTATCAGTGGCGTTGTGGTGGGCCCGTGGGATATAGCTATCGTCGCCGCGA TGATGGTGATAGTGGTTCGCTTCTCTGAACCGCTGGCGACGTTTGTCAGCTATACGGCCGTGCTGGAATTGATTAATACG GCGCTGCGCCGCATTGACGATTTGCTGGCGATTGAACCGCTTCCCGTACATCGACCTGTCGACGTGCCGCTGACGTATGC GGTTACGTTCGAGCAGGTGAGTTTTCGCTATGCCAACGAAGCTGAGGCGGTGCTCGATAGCGTGGACATTGTGCTGCCGG AGAAGGGGATGACGGCGTTGGTCGGGCCGTCGGGCTCGGGGAAAACGACGATAACGCGATTGCTCATGCGCCATGCGGAT CCGCAACACGGACGCGTGTGTATCGGGGGCGTGGACATTAGGCACATTCCAACGCGTGAAGTAAATCGGCTGATTTCCGT GGTGTTTCAGGATGTCTACCTGTTTGATGATTCAGTGCTGGCAAACATTCGGATGGCGCGTCCGGATGCCAGCGACGCAG AGGTCGAGCGGGCTGCCGAGGCTGCCCAGTGTCTGGACTTTATTCAGCGGCTGCCGCAGGGATGGCAAACGCGGCTGGGC GATATTGGCGGCAGATTATCCGGCGGCGAACGGCAGCGTATTTCGATTGCGCGAGCCTTATTGAAGGACGCGCCGATTGT GATTCTGGACGAACCGACGGCGGCGTTGGATACCGAAAGCGAGCTCGCCGTACAGCGGGCGATTGACCGGCTGGTTCAGG ACAAGACGGTTATTGTCATCGCACATCGTCTATCGACAATTGTGGGCGCACATCGAATTCTGGTTGTCGAGAATGGAGGT ATTTCCCAGCAGGGAACGCATAGCGAATTACTGCATGCTGAAGGCCGTTATCGCGCGTTGTGGAACGCGCAGCAGTCTAT CTCACTAAGGTGA Protein sequence : MNKNHTVITTQLSAWWHTYRQLERVTGSQSRLFRRCCVSLLAAAVAQGLALACLFPLLSAFTHAAASREIAMWLLLMTFL SLLTLALRWYGQGFEYRGQLAAATHELRMRLGEQLRSMPLTTLQSARAGDINALLLGSVDENLNYMLAIVNQLLLAIVTP LVIALVMLMVEWRLGVSLLLIFPAIALLYRWRRPAFAHTMQALAEANQQTSADIVEYVQGLAVLRTSCQQAERTSALRKR FQHLQQIQTSAHRSGAKPGAVVASVVELGLQGVLILGISGVVVGPWDIAIVAAMMVIVVRFSEPLATFVSYTAVLELINT ALRRIDDLLAIEPLPVHRPVDVPLTYAVTFEQVSFRYANEAEAVLDSVDIVLPEKGMTALVGPSGSGKTTITRLLMRHAD PQHGRVCIGGVDIRHIPTREVNRLISVVFQDVYLFDDSVLANIRMARPDASDAEVERAAEAAQCLDFIQRLPQGWQTRLG DIGGRLSGGERQRISIARALLKDAPIVILDEPTAALDTESELAVQRAIDRLVQDKTVIVIAHRLSTIVGAHRILVVENGG ISQQGTHSELLHAEGRYRALWNAQQSISLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtQ | YP_070127.1 | ABC transporter permease | Virulence | HPI | Protein | 1e-142 | 58 |
| ybtQ | CAA21387.1 | - | Virulence | HPI | Protein | 1e-142 | 58 |
| irp7 | YP_002346905.1 | ABC transporter permease | Not tested | HPI | Protein | 1e-142 | 58 |
| ybtQ | NP_669703.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 1e-142 | 58 |
| ybtQ | NP_993010.1 | ABC transporter permease | Virulence | HPI | Protein | 1e-142 | 58 |
| irp7 | CAB46572.1 | inner membrane ABC-transporter, Irp7 | Virulence | HPI | Protein | 3e-142 | 57 |
| irp7 | YP_001006812.1 | inner membrane ABC-transporter YbtQ | Not tested | HPI | Protein | 4e-142 | 57 |
| APECO1_1055 | YP_853072.1 | ABC transporter | Not tested | PAI IV APEC-O1 | Protein | 3e-143 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PCC21_014580 | YP_006646114.1 | ABC transporter | BAC0433 | Protein | 5e-143 | 58 |
