Gene Information

Name : PCC21_012540 (PCC21_012540)
Accession : YP_006645910.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1435080 - 1435808 bp
Length : 729 bp
Strand : -
Note : -

DNA sequence : 
ATGGATATCGCCTCCCGTTGTTACAAGGAGGTGATGATGACCACTGCTGAATTCGCCACGCCCGCCGCGATTGCAATCGA
CAAATTGTCGCACGCTTTCGCAGGCAAAACGGTGCTCGATTCCATCAGCCTCGATGTGCCAAAAGGCACCATTCTGGCCC
TGCTGGGGCCTTCCGGCTGCGGCAAAAGCACGTTGCTAAAGCTGCTGGCCGGTCTGTTACAGCCGGATGCGGGCACCATT
CATTTTGGCGATCGTCAGGTTGCCGGTCATCAACTATCCCTGCCGCCAGAGCAGCGCAATCTAGGCATGGTCTTTCAGGA
TTATGCGCTTTGGCCACATATGACCGTTGCACAAAATGTCGGGTTTCCACTGCTGATGAGGAAGGTTCCGCGCGATCTCT
GCCGCCAACGCGTTGAAGTCACGCTAGCGCGCGTCGGTCTGGCTGATTTTGCCGATCGCAAACCGGCCGATTTATCCGGC
GGCCAGCAACAGCGAGTCGCACTGGCGCGCGCCATCATCGCAGAGCCGAACATCCTGCTCTTCGATGAACCGCTATCCAA
TCTCGACCGGGATCTACGTGAATCGCTTTGTCAGGAGATGGCATCGCTCTTACGCCATCTTGGTACCACCGCCGTGTACG
TCACCCACGACAGAGGCGAAGCCAACATACTGGCACACCGTATTGTTCACATGTCGCAAGGCCACATTACTGATATCACC
ACTCTTTAA

Protein sequence : 
MDIASRCYKEVMMTTAEFATPAAIAIDKLSHAFAGKTVLDSISLDVPKGTILALLGPSGCGKSTLLKLLAGLLQPDAGTI
HFGDRQVAGHQLSLPPEQRNLGMVFQDYALWPHMTVAQNVGFPLLMRKVPRDLCRQRVEVTLARVGLADFADRKPADLSG
GQQQRVALARAIIAEPNILLFDEPLSNLDRDLRESLCQEMASLLRHLGTTAVYVTHDRGEANILAHRIVHMSQGHITDIT
TL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-25 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_012540 YP_006645910.1 ABC transporter ATP-binding protein BAC0600 Protein 7e-25 44
PCC21_012540 YP_006645910.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-22 41