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Name : PCC21_012450 (PCC21_012450) Accession : YP_006645901.1 Strain : Pectobacterium carotovorum PCC21 Genome accession: NC_018525 Putative virulence/resistance : Unknown Product : DNA-binding transcriptional activator KdpE Function : - COG functional category : - COG ID : - EC number : - Position : 1423230 - 1423910 bp Length : 681 bp Strand : - Note : - DNA sequence : TTGCAGGCCACTATTCTGATCGTTGAGGATGAAAAAGAGATCCGTCGTTTTGTTCGTCAGGCGCTGGAAGGCGAAGGCTG TCGCGTGTTTGACGCAGAAACGATGCAGCGCGGTTTGCTGGAAGCGGCCACGCGTAAGCCCGATCTGATTATTCTCGATT TGGGCCTGCCGGACGGCAACGGTATCGACTACATCCGCGATTTACGCCAGTGGAGCAGCCTGCCCGTGATTGTGCTGTCT GCCCGCACCGACGAGCAGGATAAAATAGACGCGCTGGATGCCGGTGCCGATGATTACCTGACCAAACCGTTCGGCATCGG CGAACTGCTGGCACGGTTGCGCGTCGCGCTGCGTCGTCATAGCAATACACAGCAGGAAACGCCGCTGGTGAGCTTCGGGA ATATTACTGTCGATTTACTTAATCGGCAGGTGAATCGCGACGGTCAGGAACTGCACCTGACGCCCATCGAATTTCGCCTG CTGGCAACGCTGCTCGCCAGCCCCGGCAAAGTGCTGACGCAACGTCAACTCCTGACGCAGGTTTGGGGACCGAACGCCGT CGAGCATAGCCACTATCTGCGCATTTATATGGGGCACCTGCGCCAGAAGCTGGAAAGCGATCCGGCAAGACCGCGCCATC TCTTGACTGAAACCGCTATCGGCTATCGTTTTATGCCGTAA Protein sequence : MQATILIVEDEKEIRRFVRQALEGEGCRVFDAETMQRGLLEAATRKPDLIILDLGLPDGNGIDYIRDLRQWSSLPVIVLS ARTDEQDKIDALDAGADDYLTKPFGIGELLARLRVALRRHSNTQQETPLVSFGNITVDLLNRQVNRDGQELHLTPIEFRL LATLLASPGKVLTQRQLLTQVWGPNAVEHSHYLRIYMGHLRQKLESDPARPRHLLTETAIGYRFMP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-18 | 42 |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 2e-26 | 42 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 1e-26 | 42 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 9e-18 | 41 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 9e-18 | 41 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 9e-18 | 41 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 9e-18 | 41 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 6e-18 | 41 |
