Gene Information

Name : PCC21_010420 (PCC21_010420)
Accession : YP_006645698.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : phosphate regulon response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1191917 - 1192606 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAAACGCATATTAGTCGTGGAAGATGAAGCACCAATTCGTGAAATGGTCTGCTTTGTACTGGAACAAAATGGTTA
TCAACCTGTTGAAGCTGAAGACTATGACAGCGCGGTAACGCAACTGTCGGAGCCATTCCCGGAACTGGTGTTATTGGACT
GGATGCTGCCAGGCGGGTCGGGCCTGCAATTCATCAAGCATATGAAACGTGAGGCGCTGACGCGTGATATTCCGGTTATG
ATGTTAACCGCGCGCGGCGAAGAAGAAGACCGCGTGCGCGGGCTTGAAGTGGGTGCGGATGATTACATTACCAAACCGTT
TTCACCCAAAGAGTTGGTAGCGCGTATCAAAGCCGTCATGCGCCGCATTTCACCGATGGCGGTGGAAGAAGTGATTGAAA
TGCGTGGTCTGAGCCTTGATCCTTCCTCACATCGTGTGACGACCGAAGAGCACGCGTTGGACATGGGGCCGACGGAATTT
AAACTGCTGCATTTCTTTATGACGCATCCTGAACGTGTTTATAGCCGGGAACAGTTGCTGAATCACGTTTGGGGCACTAA
CGTTTATGTTGAGGATCGTACTGTCGACGTCCATATTCGTCGCCTGCGTAAAGCGCTGGAAACCAGCGGACATGACAAAA
TGGTGCAAACCGTTCGGGGAACGGGTTACCGTTTTTCAACGCGTTACTGA

Protein sequence :
MAKRILVVEDEAPIREMVCFVLEQNGYQPVEAEDYDSAVTQLSEPFPELVLLDWMLPGGSGLQFIKHMKREALTRDIPVM
MLTARGEEEDRVRGLEVGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMRGLSLDPSSHRVTTEEHALDMGPTEF
KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALETSGHDKMVQTVRGTGYRFSTRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-35 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 8e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_010420 YP_006645698.1 phosphate regulon response regulator HE999704.1.gene2815. Protein 2e-39 42
PCC21_010420 YP_006645698.1 phosphate regulon response regulator NC_011595.7057856.p0 Protein 9e-35 41
PCC21_010420 YP_006645698.1 phosphate regulon response regulator NC_010400.5986590.p0 Protein 1e-36 41
PCC21_010420 YP_006645698.1 phosphate regulon response regulator NC_010410.6002989.p0 Protein 9e-35 41
PCC21_010420 YP_006645698.1 phosphate regulon response regulator CP001138.1.gene2239. Protein 1e-34 41
PCC21_010420 YP_006645698.1 phosphate regulon response regulator CP000647.1.gene2531. Protein 6e-36 41
PCC21_010420 YP_006645698.1 phosphate regulon response regulator BAC0596 Protein 1e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_010420 YP_006645698.1 phosphate regulon response regulator VFG1563 Protein 4e-35 41
PCC21_010420 YP_006645698.1 phosphate regulon response regulator VFG1702 Protein 3e-35 41