Gene Information

Name : PCC21_010040 (PCC21_010040)
Accession : YP_006645660.1
Strain : Pectobacterium carotovorum PCC21
Genome accession: NC_018525
Putative virulence/resistance : Virulence
Product : iron-dicitrate transporter subunit FecD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1131058 - 1132005 bp
Length : 948 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCCCCATGATTGTGTTCATCTCGATTACGCTGCTACTACTCGCCACCAGTATTCTGTCGCTGCGCATGGGCGCGAT
TCCGCTGCCGTGGTCGGCGTTGATGAGCGGCTGGCACAGCGCCAGCGAACACCACTATGTATTGACCCAATACCGTTTGC
CCCGCGTGCTGCTGGCGCTGTTCGTCGGCGCGGCACTGGCTATTTCCGGCGTGCTGGTGCAAGGGATTGTGCGTAACCCG
CTGGCATCGCCGGATATTCTCGGCGTGAACCACGCGGCGAGTCTGGCAACCGTCGGCGCACTGATGCTGGTGCCTGCGTT
GCCCGTGATCTGGCTACCGCTGCTCGCGTTTATCGGAGGCATTGTCGGGCTGCTGCTCCTACGGTTCATCGCGAGAACAT
CATCCCCAATGCGGCTGGCGCTCATCGGCGTCGCGCTATCCGCCACCTGGGCAAGCGTCACCGACTACCTGATTCTCTCC
CGTCCGCAGGATATCAACAACGCGCTGCTGTGGCTAACGGGTAGCCTGTGGGGACGCGATTGGTCATTCGTCATGGTCGC
GCTACCTGTCCTCTGCGTATTGATTCCGCTCAGCCTGCGTTTTTGCCGCGATCTGGATTTGCTCGCGCTGGGCGACGACC
GCGCCAGCACGCTGGGCGTGAATATCGGACGCATTCAGTTTTGGGGATTGGCACTCGCCGTCGCGCTCGCCGCAACCAGC
GTAGCCGTGTGCGGGCCTATCGGCTTTATTAGCCTCGTGGTGCCGCATCTGATCCGCTATCTGGTGGGAGGACGGCACCG
CTGGCTCCTCCCAACGTCTGCCGTTGCCGGTGCGTTGGTACTGCTGCTGGCCGATCTGCTGGCGCGCACGCTGAACCCGC
CAATGGAATTACCCGCAGGGATGCTCACTGCCATTATCGGCGCGCCCTGGTTTTTTGGCTTCTCGTGA

Protein sequence : 
MRPMIVFISITLLLLATSILSLRMGAIPLPWSALMSGWHSASEHHYVLTQYRLPRVLLALFVGAALAISGVLVQGIVRNP
LASPDILGVNHAASLATVGALMLVPALPVIWLPLLAFIGGIVGLLLLRFIARTSSPMRLALIGVALSATWASVTDYLILS
RPQDINNALLWLTGSLWGRDWSFVMVALPVLCVLIPLSLRFCRDLDLLALGDDRASTLGVNIGRIQFWGLALAVALAATS
VAVCGPIGFISLVVPHLIRYLVGGRHRWLLPTSAVAGALVLLLADLLARTLNPPMELPAGMLTAIIGAPWFFGFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 7e-75 71

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_010040 YP_006645660.1 iron-dicitrate transporter subunit FecD BAC0163 Protein 4e-75 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PCC21_010040 YP_006645660.1 iron-dicitrate transporter subunit FecD VFG1043 Protein 4e-75 71