Gene Information

Name : B005_5323 (B005_5323)
Accession : YP_006644377.1
Strain : Nocardiopsis alba ATCC BAA-2165
Genome accession: NC_018524
Putative virulence/resistance : Resistance
Product : ABC transporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5521151 - 5521915 bp
Length : 765 bp
Strand : +
Note : -

DNA sequence : 
GTGAGCACGCCCACCACGCAGTCCCCGTCCCCGGTCCAAGCCCCTCCGGTCGTGGTGGCGCGGGGACTCACCAAGACCTA
CGACACCGGCGGCAGCCAGGTGCACGCCCTCGCCGGGGTGGACGTGGAGTTCCACCGCGGCGCGTTCACCGCGATCATGG
GCCCCTCCGGCTCGGGCAAGTCGACCCTGATGCACTGCCTGGCCGGGCTGGACGTGCCCACCTCCGGCACCGTGCACCTG
GGCCGTACCCAGATCACCGGCATGCGCGACGGCGAACTGACGCTGCTGCGCCGCGACCGGATCGGCTTCATCTTCCAATC
GTTCAACCTGCTGCCGATGTTGACGGCCGAGCAGAACATCCTGCTGCCCTCCCAGATCGCCAAGCGCAAGGTCGACCAGG
CCCGCTTCGACCACATCATCGACGTGGTCGGACTCCGTCAGCGACTCGACCACCTGCCCGCCAAGCTCTCCGGCGGCCAG
CAGCAGCGCGTCGCGGTCGCCCGGGCCCTGCTCAACGCCCCCGAGGTCGTCTACGCCGACGAGCCCACCGGCAACCTGGA
CTCGCGTTCGGGCGCCGAGGTGCTGGCCTTCCTACAGAACTCGGCCCGGGAACTCCAGCAGACCATCGTCATGGTCACCC
ACGATCCGGTGGCCGCCTCCTACGCCGACCGCGTGGTGTTCCTGCGCGACGGCAGCCTGGTGGACGAGGTCCTCTCCCCC
ACCGCCGAGGTCGTCTCCGACCACCTGCTGAAGCTGGAGGCCTAG

Protein sequence : 
MSTPTTQSPSPVQAPPVVVARGLTKTYDTGGSQVHALAGVDVEFHRGAFTAIMGPSGSGKSTLMHCLAGLDVPTSGTVHL
GRTQITGMRDGELTLLRRDRIGFIFQSFNLLPMLTAEQNILLPSQIAKRKVDQARFDHIIDVVGLRQRLDHLPAKLSGGQ
QQRVAVARALLNAPEVVYADEPTGNLDSRSGAEVLAFLQNSARELQQTIVMVTHDPVAASYADRVVFLRDGSLVDEVLSP
TAEVVSDHLLKLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-39 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-39 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-39 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-37 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B005_5323 YP_006644377.1 ABC transporter family protein CP001581.1.gene798.p Protein 4e-46 48
B005_5323 YP_006644377.1 ABC transporter family protein CP001581.1.gene598.p Protein 1e-46 46
B005_5323 YP_006644377.1 ABC transporter family protein NC_008702.1.4606598. Protein 2e-32 45
B005_5323 YP_006644377.1 ABC transporter family protein NC_012469.1.7686878. Protein 2e-41 43