Gene Information

Name : B005_4680 (B005_4680)
Accession : YP_006643739.1
Strain : Nocardiopsis alba ATCC BAA-2165
Genome accession: NC_018524
Putative virulence/resistance : Virulence
Product : ABC transporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4898407 - 4899150 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence : 
ATGACGGCCGCCATCGAGGTCGACGACGTCACCGTCCACTACGGCGACGTCCTGGCCCTGGACCGGGTGAGCCTGTCCCT
GGAGCCCGGACGGATCTGCGGGCTGCTCGGCATGAACGGATCGGGCAAGTCCACCCTGTTCAAGACCGTGTTGGGCCTGG
TGCCCGCCGACCGGGGGCGGGTACGCGTCCTGGGCAGGGACGGCCTGGCCGCCCGCCGAGCGGGGCTCGTCGGCTACGTG
CCCCAGTCCGAACAGGTCGACTGGGCCTTCCCCGTCCGGGTGCGCGACGTGGTCATGATGGGCCGCTACGGACACATGGG
CGGCCGCCGCCGCGCCCGCGCCGCCGACCGTGAGGCGGTCGATCGGGCCCTGGCCCGCACCGACCTGACCGACCTGGCCG
ACCGCCAGATCGGGGCCCTGTCCGGCGGGCAGCGCAAACGCGCCTTCGTGGCCCGCGCCATCGCCCAGAACGCCGACGTG
CTCCTGCTGGACGAACCCTTCGCCGGGGTGGACAAGCGCTCCGAGGCCACCATCGTCGAACTGCTCCTGGAGCTGCGCCG
GGCCGGACGCACCCTGCTGGTGTCCACCCACGACCTGGCCCAGGTGCCCACCCTGTGCGACGAGGCGATCCTGCTTCAGC
GCCGCGTCATCGCCCACGGGCCGCCGGAGAAGGCACTCGAACCGGACACGCTGCTGGAGGCGTTCGGTATGCACCCCGGA
GAGGAGAACTCGTGGACACGTTGA

Protein sequence : 
MTAAIEVDDVTVHYGDVLALDRVSLSLEPGRICGLLGMNGSGKSTLFKTVLGLVPADRGRVRVLGRDGLAARRAGLVGYV
PQSEQVDWAFPVRVRDVVMMGRYGHMGGRRRARAADREAVDRALARTDLTDLADRQIGALSGGQRKRAFVARAIAQNADV
LLLDEPFAGVDKRSEATIVELLLELRRAGRTLLVSTHDLAQVPTLCDEAILLQRRVIAHGPPEKALEPDTLLEAFGMHPG
EENSWTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-45 53
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-45 53
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-46 52
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 9e-47 52
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 7e-47 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B005_4680 YP_006643739.1 ABC transporter family protein BAC0350 Protein 4e-47 52
B005_4680 YP_006643739.1 ABC transporter family protein BAC0440 Protein 1e-47 50
B005_4680 YP_006643739.1 ABC transporter family protein BAC0400 Protein 2e-32 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B005_4680 YP_006643739.1 ABC transporter family protein VFG0526 Protein 4e-47 52