Gene Information

Name : B005_4629 (B005_4629)
Accession : YP_006643689.1
Strain : Nocardiopsis alba ATCC BAA-2165
Genome accession: NC_018524
Putative virulence/resistance : Virulence
Product : ABC transporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4848154 - 4848966 bp
Length : 813 bp
Strand : +
Note : -

DNA sequence : 
ATGACCCAAGACGCCCGTCTCAGCGGCCGTGACCTGACACTCGCCTACGACCAGCGTGTGATCTCCCGGGATCTGGCCGT
CACCATCCCCGACAACTCCTTCACCGTGATCGTGGGCCCCAACGCCTGCGGTAAGTCGACGCTGTTGCGCGCCCTGTCGC
GCACCCTCAAACCGGCCGAGGGCAGTGTGCTGTTGGACGGCCAGGTCATCGGTTCCTATCCGGCCAAGGAGGTGGCGCGC
CGGTTGGGGTTGTTGCCGCAGACCTCCATCGCCCCGGACGGGATCGGTGTGGCCGATCTGGTGGCGCGCGGTCGTTTCCC
GCATCAGAGTTTCCTGCGCCAGTGGTCGGCCCAGGACGAGGCGGTGGTGTCCGAGGCGATGGAGTCGACGGGGGTGTCGG
CGTTGGCCGACCGGTCGGTGGACGAGTTGTCGGGCGGCCAACGTCAGCGGGTGTGGTTGGCGATGGTGTTGGCCCAGCAG
ACGCCGTTGCTGTTGTTGGACGAGCCCACCACCTATCTGGACATCGCCCACCAGATGGACATGCTCGATCTGTGCGCCGA
TCTGCACGCCGAGCGCGGTCACACCCTGGTGGCGGTGTTGCACGACCTCAACCACGCCTGCCGTTACGCCACCCATCTGA
TCGTGATGAAGGACGGGACGATCGTGGCCGAGGGCGAGCCGGCCACGATCGTCACCGCCGATCTGGTGGAGAAGGTGTTC
GGGTTGCCGGTGCGGGTCATCGAGGACCCGGAGACGGCCACCCCGATGATCGTGCCGGTGGACCGGCGCGGGGTGCGCCG
GGTCCACGACTGA

Protein sequence : 
MTQDARLSGRDLTLAYDQRVISRDLAVTIPDNSFTVIVGPNACGKSTLLRALSRTLKPAEGSVLLDGQVIGSYPAKEVAR
RLGLLPQTSIAPDGIGVADLVARGRFPHQSFLRQWSAQDEAVVSEAMESTGVSALADRSVDELSGGQRQRVWLAMVLAQQ
TPLLLLDEPTTYLDIAHQMDMLDLCADLHAERGHTLVAVLHDLNHACRYATHLIVMKDGTIVAEGEPATIVTADLVEKVF
GLPVRVIEDPETATPMIVPVDRRGVRRVHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-63 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-68 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-68 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-68 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-68 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 7e-62 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 7e-62 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-51 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-52 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B005_4629 YP_006643689.1 ABC transporter family protein BAC0164 Protein 2e-51 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B005_4629 YP_006643689.1 ABC transporter family protein VFG0925 Protein 8e-80 58
B005_4629 YP_006643689.1 ABC transporter family protein VFG1042 Protein 2e-51 45