Gene Information

Name : B005_4627 (B005_4627)
Accession : YP_006643687.1
Strain : Nocardiopsis alba ATCC BAA-2165
Genome accession: NC_018524
Putative virulence/resistance : Virulence
Product : fecCD transport family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4846045 - 4847019 bp
Length : 975 bp
Strand : +
Note : overlaps another CDS with the same product name

DNA sequence :
GTGGGCCTGCTCCTCGCCCTGGGGGCCCTGCTCGTCTGCGCTCTGCTGAGCATCACCGTGGGAGCCAAACCGATCCCCGT
GGCCGAGGTCTGGGCCGCCCTGACCGCCCACGACGGCGGCTACGACCACAACGTCATCCTCACCCTGCGCGTCCCCCGCA
CCATCATCGGGATCTTCGTCGGTGCCGCCCTGGGGCTGGCCGGCGCCCTCATGCAGGCGCTCACCCGCAACCCGCTGGCC
GAACCCGGCATCCTGGGCGTCAACTCCGGGGCGGCCGCCGCCGTGGTCATCGCGGTGTTCCTTTTCGGCATGGGCGGGGC
CGGTCTGGTCTGGCCCGCGTTCATCGGCGCGGCGGTGGCGGCCGTGGCCGTCTACGCGTTGGGTTCGCGCGGCCGCTCCG
CCGCCACCCCGGTCCGTCTGGCCCTGGCCGGAACGGCGATGGCCGCGGTCCTGCAAGGGCTCGTCCACGGCGTGATCGTC
CTCAACGACTTCGTCTTCGACCGCATCCGCTTCTGGCAGGTGGGCTCGTTGACCGGACGCGACCTGGACGTGTTCTGGCA
GGTGATGCCCTTCCTGGTCCTGGGCATCGTCCTCACCCTGGCCCTGGGCCCCTCGCTCAACACGATCGCCCTGGGCGACG
ACCTGGCGGCCACCCTGGGCGCCCGCATCCCCTTGATCAGGACCGCCACCGCCGTGGCCGTCATCCTGCTGTGCGGGGCG
GCCACCGCCGCGGCCGGGCCGATCTGGTTCGTGGGGCTGATCATCCCGCACGTGGCCCGGATCATCACCGGCCCCGACCA
ACGCTGGCTGCTGCCCTACTCCGCCGTCCTGGGGGCCGTCCTGCTCACCGCCGCCGACACGGTCGGACGCGTGGTCCTGC
CGGGCGCGGAGTTGGAGGTCGGCATCATCACCGCTCTGGTCGGGGCGCCGCTGTTCATCGCCCTGGTCCGCACGAAGAGG
ATGGCCCAGCTGTGA

Protein sequence :
MGLLLALGALLVCALLSITVGAKPIPVAEVWAALTAHDGGYDHNVILTLRVPRTIIGIFVGAALGLAGALMQALTRNPLA
EPGILGVNSGAAAAVVIAVFLFGMGGAGLVWPAFIGAAVAAVAVYALGSRGRSAATPVRLALAGTAMAAVLQGLVHGVIV
LNDFVFDRIRFWQVGSLTGRDLDVFWQVMPFLVLGIVLTLALGPSLNTIALGDDLAATLGARIPLIRTATAVAVILLCGA
ATAAAGPIWFVGLIIPHVARIITGPDQRWLLPYSAVLGAVLLTAADTVGRVVLPGAELEVGIITALVGAPLFIALVRTKR
MAQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-21 42
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-21 42
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-21 42
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B005_4627 YP_006643687.1 fecCD transport family protein VFG0926 Protein 2e-37 48