|
Name : B005_4206 (B005_4206) Accession : YP_006643267.1 Strain : Nocardiopsis alba ATCC BAA-2165 Genome accession: NC_018524 Putative virulence/resistance : Virulence Product : fecCD transport family protein Function : - COG functional category : - COG ID : - EC number : - Position : 4421880 - 4422881 bp Length : 1002 bp Strand : + Note : overlaps another CDS with the same product name DNA sequence : GTGCGACGCCCACGACGCCTGCGCGTCCTGGGGCTCGCGGCGCTGGTCCTGGTGGTCCTCGGCCTGATGTGCGTCTCCGT GGCCGTCGGCACGCGCGATGTCGGATGGGACGCCATCGTGGCGGCTCTGGGCGGCTCGGTGGAGGGGTTCGACGAGGCGG CCGTGGCCAAACGTGTCCCCCGCACCCTGCTCGCGGTCCTGGCCGGCGCGGCCCTGGGCGTGGCCGGTGCGGTCATGCAG GGCGTGACCCGCAACCCGATCGCCGACCCCGGCATCCTCGGCGTGAACATGGGAGCCTCGCTCGCCGTGGTCGTGGGGAT GGCCTCCTTCGGCCTGGCCTCGGCCACCCACTTCGTCTGGGCGGCCGTCGTCGGAGGCGGAATCACCGCCGTCTTCGTCT ACGTCGTCGGCTCCCTGGGCCGCGGCGGCGCCACCCCGCTCAAACTCGCACTGGCGGGCACGGCCGTCTCGGCCGCCCTG GCCTCGTTCATCAGCGCCATCGTCCTGCCGCGCAACGACATCGCCGGCGGGGTCCGCTCCTGGCAGATCGGCGGGGTGGG CGGCGCGACCTACGACTCGCTGACGCAGGTCCTGCCCTTCCTGGTCGCGGGCTTCGCGCTGTGCCTGGCGTGCGCGCGCG GACTCGACATGCTGGCCCTGGGCGACGACCTGGCCGCCGGCCTGGGGGAGAGGGTGGCCCTGGCCCGAGGCGGGGCCTCC CTGGGCGCGGTGACCCTGTGCGGCGCCGCCACCGCCGTCACCGGGCCGATCGCCTTCGTCGGGTTGGTCGTACCGCACGT GTGCCGGCTCCTGACCGGCCCCGGTCACCGATGGCTGATCCCCTTCTCCGCCCTGGGCGGGGCCGCGCTGCTCACCGCGG CGGACGTGGTCGGCCGGATCGTGGCCCGCCCGGCCCAGATCGACGTCGGGATCGTGACCGCCCTCATCGGCGCCCCCTTC TTCATCCACATCGTCCGCCGTCAGAAGGTCCGCTCGCTGTGA Protein sequence : MRRPRRLRVLGLAALVLVVLGLMCVSVAVGTRDVGWDAIVAALGGSVEGFDEAAVAKRVPRTLLAVLAGAALGVAGAVMQ GVTRNPIADPGILGVNMGASLAVVVGMASFGLASATHFVWAAVVGGGITAVFVYVVGSLGRGGATPLKLALAGTAVSAAL ASFISAIVLPRNDIAGGVRSWQIGGVGGATYDSLTQVLPFLVAGFALCLACARGLDMLALGDDLAAGLGERVALARGGAS LGAVTLCGAATAVTGPIAFVGLVVPHVCRLLTGPGHRWLIPFSALGGAALLTAADVVGRIVARPAQIDVGIVTALIGAPF FIHIVRRQKVRSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SPN23F_09540 | YP_002510937.1 | ferric siderophore ABC transporter permease | Virulence | PPI-1 | Protein | 3e-37 | 43 |
| SP_1033 | NP_345508.1 | iron ABC transporter permease | Virulence | PPI-1 | Protein | 3e-37 | 43 |
| fagA | YP_003782432.1 | integral membrane protein | Virulence | PiCp 1 | Protein | 3e-13 | 41 |
| fagA | YP_005684490.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 3e-13 | 41 |
| fagA | YP_005680309.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 3e-13 | 41 |
| fagA | YP_005682399.1 | hypothetical protein | Virulence | PiCp 1 | Protein | 3e-13 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| B005_4206 | YP_006643267.1 | fecCD transport family protein | VFG0926 | Protein | 9e-26 | 44 |
