Gene Information

Name : B005_4202 (B005_4202)
Accession : YP_006643263.1
Strain : Nocardiopsis alba ATCC BAA-2165
Genome accession: NC_018524
Putative virulence/resistance : Virulence
Product : ABC transporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4417688 - 4418470 bp
Length : 783 bp
Strand : -
Note : -

DNA sequence : 
ATGGAACTGCGTCTGGACGGCCTCTCCGTCGACCTGGACGGGCGGCGGATCGTACGGCGGCTCACCCTCGACGTGCCCGA
CGGCCGGGTGGTCGGCCTCGTCGGCCCCAACGGATCGGGGAAGTCGACCGCCCTGCGCTGCGTCTACCGGGCCCTGTCCC
CCGATGAGGGACAGGTGCTGGTCGACGGGGACGACCTCGCCGCGATGAGCATGCGCGACTCGGCACGACGGATCGCCGCG
CTCACCCAGGAGGGCGGCGTCGACCTCGACTTCACCGTCGAGGAGCTGGTCGCCCTGGGGCGCACCCCGCACCTGCCCGG
CGGCCGGCGGCTCGACGCCCGCGAACGCGAGCTGTGCCGGTGGGCGATGGCCCGGATGGGCGTGTCCCACCTGGCCGGGC
GCGGGGTGCTCGAACTCTCCGGCGGCGAACGTCAACGCGTCCTCGTGGCCCGCGCCCTGGTCCAGGAACCCCGGGTGCTG
GTCCTGGACGAGCCCACCAACCACCTCGACGTGCACCACCGCCTCGAACTGCTCGCCCTGGTCCGCGAGTCGGGCGTGAC
CGCGCTCGTGGTCCTGCACGACCTCAACCTGGCCGCCGCGGCCTGCGACGTCATCGGCGTGCTCTCCGAGGGCGCGCTCG
TGGCCGTCGGAACGCCCGAGGAGGTCCTGACCGAGGAGCTCCTCCACACGGTCTTCGGGGTCGAGGCCACCGTCGTCGCC
CACCCCCGGACCGGCCGTACCCAGCTGCTCTACCACCTGCCCACCGCACGAAAGGAAGCCTGA

Protein sequence : 
MELRLDGLSVDLDGRRIVRRLTLDVPDGRVVGLVGPNGSGKSTALRCVYRALSPDEGQVLVDGDDLAAMSMRDSARRIAA
LTQEGGVDLDFTVEELVALGRTPHLPGGRRLDARERELCRWAMARMGVSHLAGRGVLELSGGERQRVLVARALVQEPRVL
VLDEPTNHLDVHHRLELLALVRESGVTALVVLHDLNLAAAACDVIGVLSEGALVAVGTPEEVLTEELLHTVFGVEATVVA
HPRTGRTQLLYHLPTARKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 8e-31 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B005_4202 YP_006643263.1 ABC transporter family protein BAC0164 Protein 2e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B005_4202 YP_006643263.1 ABC transporter family protein VFG1042 Protein 2e-33 42