Gene Information

Name : B005_3962 (B005_3962)
Accession : YP_006643024.1
Strain : Nocardiopsis alba ATCC BAA-2165
Genome accession: NC_018524
Putative virulence/resistance : Unknown
Product : nickel import ATP-binding protein NikE
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.24
Position : 4149826 - 4151499 bp
Length : 1674 bp
Strand : +
Note : -

DNA sequence :
ATGACCCGCAACCGATCCGACGTCTCCGCCCCGGACGGCACCACACCGGTGCTGGAGGTCGAAGACCTCACCGTCGCCTA
CACCTCTCGCCACGTGGAGACCCCGGTCCTGCACGGCGTCTCCCTGACCGTCCATCCCGGCGAGGTGGTCGCGGTGGTCG
GCGAGTCCGGTTCCGGAAAGAGCACCACCGCGCAGGCCGTCATCGGTCTCCTGCCCGACAACGGACGGGTGACCGGTGGC
CGGATCCGCCTCAACGGCACCGACATCACCTCGTGGAGCGACAGGCGGATGGAGTCGGTGCGGGGGAGAAGGGTGGGACT
CGTCCCGCAGGACCCCGGTACCTCCCTCAACCCTGTCAAGCGGATCGGGAACGCGATCGCCGAGGTCATGCGGATCCACC
GATGGGCCGACGAACGGCGGATCCGCGCCCGGGTGCTCGAACTCCTGGAACGCGTGGGCATCCCCGATCCGGAACGTCGG
GCCCGCCAGTACCCGCACGAACTCTCCGGGGGCATGCGTCAACGCGTCCTCATCGCCGCGGCGATCGCCCTGCGCCCGGA
GCTGATCATCGCCGACGAGGCCACCAGCGCCCTCGACGTCACCGTGCAGCGGACCGTCCTCGACCTGATCGACGAACTCA
GAACGGAGGACGGCACGTCGGTCCTGTTCATCACCCACGACCTCGCGGTGGCCTCCGACCGGGCGGACCGGGTGGTGGTG
CTCGAAGGCGGTCGCGTCCGGGAGGCCGGCGACACGGCGACGGTGCTGTCCACACCGGGCCACGCCTACACCCGGCGGCT
GGTCGCCGACGCCCCCGCCCTGAACGGCGCGGGGCACCGCACCGCCGAACGGACCGCCGCCCTGCTCGCCGAACGGGCCG
ACCTGCCACCGGCGATCGCCGTCACGGACCTGGTGCAGGAGTTCGGAACCCGCCGGGACCGGTTCCGCGCCGTGGACGGG
GTCTCCTTCACGGTGACGCCGGGCACCACCCACGCGATCGTGGGGGAGTCCGGCTCGGGCAAGACCACCACCGCCCGCGC
CGTCATGGGCTTTCGCCGCCCCACCTCCGGCGAGGTGTCGGTCGGGGGAACGGAGATCGGCCCGCTCCGGGGCAGGGGTC
TGCGCGACCTGCGCCGTCGGCTCCAGATGGTCTACCAGAACCCCTACGGCTCGCTCGATCCCCGGCGGACGGTCGGCTCC
ATCGTCGCCGAACCCCTGGTCAACTACCGGATCGGTGACAGGGCCGAACGCGCGCGCACGGTCGCCGAGTTCCTGGAGCG
GGTCGCGCTCCCGACGCACCTGAGCGACCGTCGACCCCGGGAACTCTCCGGCGGCCAGCGCCAACGCGTGGCCATCGCCC
GAGCCCTGGTGCTGCGACCCGAGGTCGTGGTCCTGGACGAACCCGTCTCGGCGCTCGACGTCACCGTCCAGGCGCAGATC
CTCGACCTGCTCGAACGACTCCAGGAGGATCTGGGACTGACCTACCTGTTCATCTCGCACGACCTCGCGGTGGTGCGGCG
CCTCTCGCACACCCTGTCGGTGATGCGCGGCGGTCGGGTGGTGGAGTCCGGCGTGACCGAGAAGGTCTTCGCCGATCCCC
GCCACGAGTACACGCGCGGCCTCATCGAGGCCATCCCCGGCCGTCGGGAGCCCGCGCTCCCGGCCCGCCCCTGA

Protein sequence :
MTRNRSDVSAPDGTTPVLEVEDLTVAYTSRHVETPVLHGVSLTVHPGEVVAVVGESGSGKSTTAQAVIGLLPDNGRVTGG
RIRLNGTDITSWSDRRMESVRGRRVGLVPQDPGTSLNPVKRIGNAIAEVMRIHRWADERRIRARVLELLERVGIPDPERR
ARQYPHELSGGMRQRVLIAAAIALRPELIIADEATSALDVTVQRTVLDLIDELRTEDGTSVLFITHDLAVASDRADRVVV
LEGGRVREAGDTATVLSTPGHAYTRRLVADAPALNGAGHRTAERTAALLAERADLPPAIAVTDLVQEFGTRRDRFRAVDG
VSFTVTPGTTHAIVGESGSGKTTTARAVMGFRRPTSGEVSVGGTEIGPLRGRGLRDLRRRLQMVYQNPYGSLDPRRTVGS
IVAEPLVNYRIGDRAERARTVAEFLERVALPTHLSDRRPRELSGGQRQRVAIARALVLRPEVVVLDEPVSALDVTVQAQI
LDLLERLQEDLGLTYLFISHDLAVVRRLSHTLSVMRGGRVVESGVTEKVFADPRHEYTRGLIEAIPGRREPALPARP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-107 51
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-71 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-71 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-71 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-71 43