Gene Information

Name : B005_0310 (B005_0310)
Accession : YP_006639447.1
Strain : Nocardiopsis alba ATCC BAA-2165
Genome accession: NC_018524
Putative virulence/resistance : Unknown
Product : integrase core domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 310270 - 311295 bp
Length : 1026 bp
Strand : -
Note : -

DNA sequence :
ATGGCGCCGCCCGCCACGGAACGGTCCCGCTACCTGACCGGCGACGAACGCATCCGGATCGCCGACCTGGACCGCGAAGG
CATGGGTGTGCGGACGATCGCCGCCGAGCTGGGCCGAGCTCCCTCCACCATCAGCCGGGGGTTGCGCCGCAACGCCACCG
TGGACCAGCGCGGTAGACGGCACTACCGCCCCTATGCCGCCCAGGCCCGAGCCCAGGCCCGCCGACCGCGACCCAAACCC
TCCAAGATCACCCTGGACCCCGAACTGCGCACCCGGGTCCAAGACCTGCTCGACGAGCGCTGGAGCCCGGAGCAGATCAG
CCGTAGGCTCAAACGGGACTTCCCCGACCGGCCGGAGCTGCACATGTGCCACGAAACCGTCTACCAGGCCCTGTACGTCC
AGGCCCGTGGCGGATTGCGTCGCGACGTGACCGCCGCTCTTCGCTCGGGCCGTACCCGACGCAAACCCCGCGGCCAGGCC
CGGCAACGCCGCCCGCGCTTCGCCCATCCGATGGTGATGATCAGCGAACGCCCACCAGAGGTCATCGATCGGGCGGTGCC
CGGCCATTGGGAAGGGGACCTGATCATCGGCTCCGGCGGCGGCTCGGCCATCGGCACCTTGGTAGAGCGCTCGACCCGGT
ACACGATGCTGGTGCACCTGCCCCACGGTCGTGGCGCCGAACAGGTCGCGGGCGCCCTGGCGGCCACGGTCACGACCCTG
CCCGCCCATCTGGCGCGCTCGGTGACCTGGGACCAGGGATCGGAACTGAGCCGCCACCACGAGTTCACCACCGCCACGGA
CATCCCGGTCTATTTCTGCGACCCGGCCAGCCCTTGGCAGCGCGGCTCGAACGAGAACACCAACGGCCTGCTCAGGCAGT
ACTTCCCCAAGGGCACAGACCTGTCGGTGCATTCACGTGAGCACTTGGAAGCGGTCGCTGTCCAGCTCAACGGGCGCCCA
CGCAAGACGCTCGGCTGGGATACCCCGGCCGAGCGTCTGGCTAAGCTGCTCGAAGCGAGCAACTGA

Protein sequence :
MAPPATERSRYLTGDERIRIADLDREGMGVRTIAAELGRAPSTISRGLRRNATVDQRGRRHYRPYAAQARAQARRPRPKP
SKITLDPELRTRVQDLLDERWSPEQISRRLKRDFPDRPELHMCHETVYQALYVQARGGLRRDVTAALRSGRTRRKPRGQA
RQRRPRFAHPMVMISERPPEVIDRAVPGHWEGDLIIGSGGGSAIGTLVERSTRYTMLVHLPHGRGAEQVAGALAATVTTL
PAHLARSVTWDQGSELSRHHEFTTATDIPVYFCDPASPWQRGSNENTNGLLRQYFPKGTDLSVHSREHLEAVAVQLNGRP
RKTLGWDTPAERLAKLLEASN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0764 NP_939135.1 transposase Not tested Not named Protein 2e-46 46
CDC7B_2034 YP_005163475.1 transposase-like protein Not tested Not named Protein 1e-45 45
CDC7B_2059 YP_005163500.1 transposase-like protein Not tested Not named Protein 2e-45 45
unnamed CAC39292.1 - Not tested LPA Protein 4e-43 44