Gene Information

Name : metB (B005_2875)
Accession : YP_006641955.1
Strain : Nocardiopsis alba ATCC BAA-2165
Genome accession: NC_018524
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase MetB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2998066 - 2999211 bp
Length : 1146 bp
Strand : +
Note : -

DNA sequence :
ATGAAGTTCGACGGGTTTGAAACACGGGCCATCCACGCGGGCCAGGAACCGGACGCCGGTACCGGAGCCGTGGTCGTGCC
GATCTACCAGACGAGTACCTACGCCCAGGACGGCGTGGGCGGACTGCGCCAGGGGTACGAGTACTCCCGCACCGCCAACC
CCACGCGCACCGCCCTGGAGGAGTGCCTGGCCGCGCTGGAGTCCGGCGCGCGCGGGCTGGCCTTCGCCTCCGGCATGGCG
GCCGAGGACACCCTGCTGCGCATGGTGCTCTCCCCGGGCGACCACATCATCATCCCCGGTGACGCCTACGGGGGCACCTT
CCGCCTCATCTCCAAGGTGGTCGAGCGCTGGGGCGTCTCCTGGGACGCGGTCGACCAGACCGACGTCGAGGCGGTGCGCG
CGGCGATGCGTCCCGAGACCAAGGTCGTGTGGACCGAGACGCCCACCAACCCGCTCCTGGGCATCACCGACATCGAGACG
GTCGCGCGGATCGCGCACGACGGCGGCGCCCTCCACGTCGTCGACAACACGTTCGCCTCGCCCTACCTACAGCAGCCCCT
CACCCTGGGCGCCGACGTGGTCGTGCACTCCACCACCAAGTACGTCGGCGGCCACTCCGACGTGGTCGGCGGGGCGCTGA
TCGTCGCCGACGCCGAACTGGGGGAGCGGCTGGCCTTCCACCAGAACACCATGGGCGCGGTCGCGGGCCCCTTCGACGCC
TGGCTGACGTTGCGCGGGGTCAAGACCCTGGGCGTGCGGATGGACCGGCACAGCGAGAACGCCGAGCGGGTCGTGGCCGC
GCTCGAAGGGCACCCGGCGGTGCGGCGCGTGTACTACCCGGGGCTGGACTCCCACCCGGGCCACAAGATCGCCGAGCGGC
AGATGCGCGCCTTCGGCGGGATGGTCTCCTTCGAGCTGCGCGACGGTGAGAAGGCTGCGCTGGAGCTGTGCGAGCGGACG
AAGGTCTTCACCCTGGGCGAGTCCCTGGGCGGGGTCGAGTCGCTCATCGAGCACCCGGGCCGGATGACGCACGCCTCGAC
GGCGGGTTCGGCGCTGGAGGTCCCGGCGGACCTGGTGCGGATCTCGGTGGGTATCGAGTCCGGTGACGACCTGGTCGCCG
ACCTGGAGCAGGCCCTGGAGGGCTGA

Protein sequence :
MKFDGFETRAIHAGQEPDAGTGAVVVPIYQTSTYAQDGVGGLRQGYEYSRTANPTRTALEECLAALESGARGLAFASGMA
AEDTLLRMVLSPGDHIIIPGDAYGGTFRLISKVVERWGVSWDAVDQTDVEAVRAAMRPETKVVWTETPTNPLLGITDIET
VARIAHDGGALHVVDNTFASPYLQQPLTLGADVVVHSTTKYVGGHSDVVGGALIVADAELGERLAFHQNTMGAVAGPFDA
WLTLRGVKTLGVRMDRHSENAERVVAALEGHPAVRRVYYPGLDSHPGHKIAERQMRAFGGMVSFELRDGEKAALELCERT
KVFTLGESLGGVESLIEHPGRMTHASTAGSALEVPADLVRISVGIESGDDLVADLEQALEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-87 50
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-88 50
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-65 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_006641955.1 cystathionine gamma-synthase MetB BAC0207 Protein 7e-68 44