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Name : lysS (B005_2571) Accession : YP_006641660.1 Strain : Nocardiopsis alba ATCC BAA-2165 Genome accession: NC_018524 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 2683514 - 2685016 bp Length : 1503 bp Strand : + Note : - DNA sequence : GTGAATGACGCGCACGACGACACCTACGACGACCTGCCCGAACAGATGCGGGTCCGGCGACAGAAACTGGACCGTCTCCG GGAGGAGGGCATCGACCCCTTTCCCGTGAACTTCCCGCGGACCGCGTCGATCGGTCCCGTGCGCGACGAACACGAGGGCC TGGAGCCCGATACCCACACCGGGGACAAGGTCGCCATCGCCGGCCGTGTGATGCTCTACCGCACCGGTGGCAAGCTGTGC TTCGCCACCCTGCGCGACGAGACCGGGGACGTGCAGATCATGCTGTCCCTGGACCAGATCGGCAAGGAGCGTCTCGACGC CTGGAAGGCCGACGTCGACCTCGGCGACCACGTGGGTGTGGAGGGCGAGGTCATCACCTCGCGCCGCGGAGAGCTGTCCA TCCTGGTGAGCTCCTGGACGCTCACGGCCAAGTGCCTGCGTCCGCTCCCGGAGAAGCACAAGGGTCTCACCGACCCCGAG GCCCGGGTCCGGCAGCGCTACGTCGACCTGATCGTCAACCCCGAGTCGCAGCAGATGGTGCGCCGTCGTTCGGCCGCCAT CCGGGCGATCCGAGAGGGGCTGAGCGACCGCGACTTCATCGAGGTGGAGACCCCGATGCTGATGCGGGTGCACGGTGGCG CCACGGCGCGTCCGTTCACCACCCACATCAACGCCTACGACATGGACCTGTACCTGCGCATCGCGCCGGAGCTGTCGCTC AAGCGGCTGGTCGTGGGCGGGCTGGAGAAGGTCTTCGAGATCAACCGGAACTTCCGGAACGAGGGCGCGGACTCCACGCA CAACCCCGAGTTCACGATGCTGGAGTTCTACCAGGCCTACGCCGACTACAACGTCATGGCGGACGTGACCCGCGAACTCA TCCAGAACGCGGCGCTCGCCGCCTTCGGCACCACCATGGTCGAGCGCGACGGTCGGACCTATGACCTGGGCGGCGAATGG CCGCGGATCACCCTCTACGGAGCTGTGTCCGAAGCGGTCGGCGCCGAGGTCACCCCGCGTACGCCGATCGAGGAGGTCCG GCGGCTGGCCGAGGCCCGCGATGTGGAGTTCGACCCGGCCTGGGGCCAGGGCAAGCTGGTCGAGCACATCTTCGAGGAGC TGGTGGAGCATACGCTGATCCAGCCCACCTTCGTGTGCGACTACCCGCTGGAGACGAGCCCCCTCACCCGTCAGCACCGC GAGGACCCGCTGCTCACCGAGAAGTGGGACCTCATCGGCTTCGGGATGGAGCTGGGCACGGGCTACTCGGAGCTGGTCGA CCCGGTCGAGCAGCGCCGTCGTCTCACCGAACAGTCGCTGATGGCGGCCGAGGGCGACCCCGAGGCGATGCAGCTCGACG AGGACTTCCTGCGTGCCCTGGAGTACGGAATGCCGCCGACCGGTGGTGTGGGCGTCGGTATCGACCGTCTGCTCATGGCC TTCACCGGAAAGAACATTCGGGAGACCGTTCTCTTCCCGATCGTGAAGCCCTCCGGGGAGTGA Protein sequence : MNDAHDDTYDDLPEQMRVRRQKLDRLREEGIDPFPVNFPRTASIGPVRDEHEGLEPDTHTGDKVAIAGRVMLYRTGGKLC FATLRDETGDVQIMLSLDQIGKERLDAWKADVDLGDHVGVEGEVITSRRGELSILVSSWTLTAKCLRPLPEKHKGLTDPE ARVRQRYVDLIVNPESQQMVRRRSAAIRAIREGLSDRDFIEVETPMLMRVHGGATARPFTTHINAYDMDLYLRIAPELSL KRLVVGGLEKVFEINRNFRNEGADSTHNPEFTMLEFYQAYADYNVMADVTRELIQNAALAAFGTTMVERDGRTYDLGGEW PRITLYGAVSEAVGAEVTPRTPIEEVRRLAEARDVEFDPAWGQGKLVEHIFEELVEHTLIQPTFVCDYPLETSPLTRQHR EDPLLTEKWDLIGFGMELGTGYSELVDPVEQRRRLTEQSLMAAEGDPEAMQLDEDFLRALEYGMPPTGGVGVGIDRLLMA FTGKNIRETVLFPIVKPSGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 5e-122 | 53 |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-88 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006641660.1 | lysine--tRNA ligase | VFG1668 | Protein | 5e-88 | 42 |
