Gene Information

Name : B005_1518 (B005_1518)
Accession : YP_006640637.1
Strain : Nocardiopsis alba ATCC BAA-2165
Genome accession: NC_018524
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1557849 - 1558808 bp
Length : 960 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGCCGCCTCCTCGCCCCGTGGTCGGGGTCTCCAGTTGCCTGCTCGGCGCTCCGGTGCGTTACAACGGCGGGCACTC
GCGCTACCGGTTCCTCACCGACGAACTGGACCGACACGTGAACTGGCTCCCCGTCTGCCCCGAGGCGGAGATCGGCCTGG
GGGTACCTCGCCCGACCCTGCGCCTGCGGGACTCGGACGGCTCGGACCGGGTGGTCTCCACCAAGGACGGCGTCGACCAC
ACCGACGACCTCGCGGGTGTCGCGGATCGCCACCTCAAGGAGCTGCGCCGCCTGGACGGCTACGTGCTCAAGAACAAGTC
CCCGAGTTGCGGGCTGCTCTCACTGCCCGTGTTCGACGAGAAGGGCGATCGTCGACGCGGTACCGGGCGGGGCGCCTTCG
CGGCCAGGCTCACCGCCCTTCTCCCCCTCCTGCCCGTCGAGGAGCAGGGCCGCCTGTCCGACCCGGTACTGCGCGAGCAC
TTCGTGGAACGGGTGTTCGCCCATTCCCGCCTGCGCTCCCTACTCGAAGGGGCATGGCGACCGCGCGACCTGGTGGAGTT
CCACACTCGGCACAAACTCCAGCTGATGGCGCACTCGCCGGACGGCTACCGGGAGACGGGACGGATCGTGGCCCGGGCCG
GCGGGGGCGACCGCGAGGAGATCGCCGCCGCCTACGCGGAGGCCTTCCAACGGACGCTCGCGCTGCGGACCACGCGGGGC
AAGCACGCCAACGTGCTCCAGCACATCTTCGGCATGGTGAGCCCGACACTGGACGACACGCGCAGGCACGATCTCCTGGC
CGGAATCGAGGAGTACCGGGAGGGCCAGAGTCCGCTCAGTCTGCCAGTGGCCCTGTTGCGACACCACTGCCTGGCGGAGG
ACCTGGGGTGGGCCGGTGGGCAGACCTACCTGCGCCCCTACCCCGACGCGCTGCGCCTTCGGCACCCGGTGGCGGTCTGA

Protein sequence : 
MKPPPRPVVGVSSCLLGAPVRYNGGHSRYRFLTDELDRHVNWLPVCPEAEIGLGVPRPTLRLRDSDGSDRVVSTKDGVDH
TDDLAGVADRHLKELRRLDGYVLKNKSPSCGLLSLPVFDEKGDRRRGTGRGAFAARLTALLPLLPVEEQGRLSDPVLREH
FVERVFAHSRLRSLLEGAWRPRDLVEFHTRHKLQLMAHSPDGYRETGRIVARAGGGDREEIAAAYAEAFQRTLALRTTRG
KHANVLQHIFGMVSPTLDDTRRHDLLAGIEEYREGQSPLSLPVALLRHHCLAEDLGWAGGQTYLRPYPDALRLRHPVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 2e-47 41
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-47 41
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 2e-47 41
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 2e-47 41
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 2e-47 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B005_1518 YP_006640637.1 hypothetical protein VFG0490 Protein 9e-48 41