Gene Information

Name : regX3 (B005_1505)
Accession : YP_006640625.1
Strain : Nocardiopsis alba ATCC BAA-2165
Genome accession: NC_018524
Putative virulence/resistance : Virulence
Product : sensory transduction protein regX3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1544000 - 1544698 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence :
GTGACGCGCGTACTCGTAGTAGAGGACGAGGAGTCCTACAGCGACGCCCTGTCGTACATGCTGCGCAAGGAGGGTTTCGA
GGTCGCGGTGGCTCCCACCGGCACCGTGGCCCTGGAGACCTTCGACCGGACCGGGGCCGACCTGGTACTGCTCGACCTCA
TGCTGCCGGGGCTCTCCGGCACGGAGGTCTGCCGGACCCTCCGGCAGAAGTCCAACGTCCCCGTCATCATGCTCACCGCC
AAGGACTCCGAGATCGACAAGGTCGTCGGTCTGGAGTTGGGCGCCGACGACTACGTGACCAAGCCGTTCTCCTCCCGCGA
GCTCGTGGCGCGCATCCGCGCGGTGCTGCGTCGTCGGGGCGAGGACGACGTCGTCCTTCCCGCCGCCCTGGAGGCCGGCC
CCGTCCGTATGGACGTGGAGCGGCACGTGGTGACGGTGCGCGGCGACAACGTACAGCTCCCGCTGAAGGAGTTCGAACTG
CTGGAGGTGCTCCTCCGCAACGCGGGCCGGGTGCTCACCCGTATGCAGCTCATCGACCGCGTGTGGGGCGCCGACTACGT
CGGGGACACCAAGACCCTCGACGTGCACGTCAAGCGCCTGCGCGCCAAGATCGAGGAGGACCCGAGCCACCCGCGCTACA
TCGTGACGGTGCGCGGCCTGGGGTACAAGTTCGAGCCGGTCACCGTCGAAGCGGAGTGA

Protein sequence :
MTRVLVVEDEESYSDALSYMLRKEGFEVAVAPTGTVALETFDRTGADLVLLDLMLPGLSGTEVCRTLRQKSNVPVIMLTA
KDSEIDKVVGLELGADDYVTKPFSSRELVARIRAVLRRRGEDDVVLPAALEAGPVRMDVERHVVTVRGDNVQLPLKEFEL
LEVLLRNAGRVLTRMQLIDRVWGADYVGDTKTLDVHVKRLRAKIEEDPSHPRYIVTVRGLGYKFEPVTVEAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-20 42
vanRB YP_001698483.1 regulatory protein Not tested Not named Protein 6e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
regX3 YP_006640625.1 sensory transduction protein regX3 AE000516.2.gene3505. Protein 3e-36 50
regX3 YP_006640625.1 sensory transduction protein regX3 HE999704.1.gene2815. Protein 1e-35 49
regX3 YP_006640625.1 sensory transduction protein regX3 NC_012469.1.7685629. Protein 8e-40 47
regX3 YP_006640625.1 sensory transduction protein regX3 NC_002952.2859905.p0 Protein 2e-35 47
regX3 YP_006640625.1 sensory transduction protein regX3 NC_002745.1124361.p0 Protein 2e-35 47
regX3 YP_006640625.1 sensory transduction protein regX3 NC_009782.5559369.p0 Protein 2e-35 47
regX3 YP_006640625.1 sensory transduction protein regX3 NC_002951.3237708.p0 Protein 2e-35 47
regX3 YP_006640625.1 sensory transduction protein regX3 NC_007622.3794472.p0 Protein 2e-35 47
regX3 YP_006640625.1 sensory transduction protein regX3 NC_002758.1121668.p0 Protein 2e-35 47
regX3 YP_006640625.1 sensory transduction protein regX3 NC_009641.5332272.p0 Protein 2e-35 47
regX3 YP_006640625.1 sensory transduction protein regX3 NC_013450.8614421.p0 Protein 2e-35 47
regX3 YP_006640625.1 sensory transduction protein regX3 NC_007793.3914279.p0 Protein 2e-35 47
regX3 YP_006640625.1 sensory transduction protein regX3 NC_003923.1003749.p0 Protein 3e-35 47
regX3 YP_006640625.1 sensory transduction protein regX3 BAC0125 Protein 3e-24 43
regX3 YP_006640625.1 sensory transduction protein regX3 AE015929.1.gene1106. Protein 2e-21 42
regX3 YP_006640625.1 sensory transduction protein regX3 BAC0308 Protein 5e-23 42
regX3 YP_006640625.1 sensory transduction protein regX3 BAC0083 Protein 5e-24 42
regX3 YP_006640625.1 sensory transduction protein regX3 AE016830.1.gene1681. Protein 2e-36 42
regX3 YP_006640625.1 sensory transduction protein regX3 BAC0197 Protein 4e-22 42
regX3 YP_006640625.1 sensory transduction protein regX3 BAC0111 Protein 2e-23 41
regX3 YP_006640625.1 sensory transduction protein regX3 NC_012469.1.7686381. Protein 2e-33 41
regX3 YP_006640625.1 sensory transduction protein regX3 BAC0638 Protein 3e-13 41
regX3 YP_006640625.1 sensory transduction protein regX3 CP000034.1.gene3671. Protein 2e-26 41
regX3 YP_006640625.1 sensory transduction protein regX3 CP000647.1.gene2531. Protein 4e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
regX3 YP_006640625.1 sensory transduction protein regX3 VFG1386 Protein 7e-21 44
regX3 YP_006640625.1 sensory transduction protein regX3 VFG1389 Protein 3e-22 43
regX3 YP_006640625.1 sensory transduction protein regX3 VFG0596 Protein 3e-20 42
regX3 YP_006640625.1 sensory transduction protein regX3 VFG1390 Protein 4e-25 41