Gene Information

Name : A79E_0816 (A79E_0816)
Accession : YP_006634647.1
Strain : Klebsiella pneumoniae 1084
Genome accession: NC_018522
Putative virulence/resistance : Virulence
Product : type 1 fimbriae anchoring protein FimD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 830884 - 833496 bp
Length : 2613 bp
Strand : -
Note : -

DNA sequence :
ATGTCACATCGGAAATATGGACTGGATCATTTAGGTTGCCGAACTGCCCGGCGCCTGGTATCTCCGGCGCTGGCGCTGTG
GCTCTGCTCACAGCCGTTTGCCGCGCGGGCGGACCTCTATTTTAACCCCCGCTTTTTAGCTGACGATCCGGCGGCGGTGG
CTGACCTGTCGGGATTTGAAAAAGGCCAGGAGGTTCCGCCAGGCACCTATCGCGTCGATATTTATCTCAACAATGGTTTT
ATGACCACCCGGGACGTCACTTTCCAGGCCGATGCCCAGGGTCACGGTCTGTCACCCTGCCTGACGCGCGGCCAGCTGGC
GAGCATGGGTGTGGATACCGGTCGGGTGCCGGGCATGGCAACGCTGGACAGCACGGCCTGCGTGCCGCTGACCACGCTTA
TCAGCGAAGCTACCACGCGCTTCGACGTCGGGCAGCAACGCCTGTACCTCACCGTCCCCCAGGCATTTATGGGTAACCAT
GCGCGCGGCTATATTCCGCCGGAGCTGTGGGATAACGGTATCACCGCCGGGCTGATTAACTATAACTTCACGGGCAATAA
CGCCCATAACACCACAGGTGGCAGCAGCCGTTACGCCTATCTGAATCTACAGAGCGGCCTGAACATTGGCGCCTGGCGTC
TGCGCGATAACAGCACCTGGAGCTACAGCAGCGGCGGTAGCACCTCATCCAACGAGAATCGCTGGCAGCACGTTAACAGC
TGGCTTGAGCGGGACATCACGCCTCTGCGTTCGCGACTCACCCTAGGGGACAGCTACACCAACGGCGATGTCTTCGACGG
GATCAACTTCCGCGGCGCCCAGCTGGCCTCCGACGACAATATGCTACCGGACAGCCAGAAAGGCTTTGCGCCGGTGATCC
ACGGGATCGCCCGCGGCACGGCGCAGGTGTCAATCAGGCAAAACGGCTACGAAATCTACCAGAGCACAGTGCCGCCGGGA
CCATTTACCATCGACGATCTCTACGCCGCGGGCAATGGCGGCGATCTGCAGGTCACGATCAAAGAAGCGGATGGCTCCCG
CCAGGTCTTCAGCGTGCCCTGGTCAACGGTGCCGGTTCTCCAGCGTGAAGGCCATACCCGCTTCGCCCTCACCGCCGGGG
AGTACCGCAGCGGCAACAGTCAGCAGGAAACGCCCGATTTTTTCCAGGGCACGGCCATGCATGGCCTGCCGGCAGGCTGG
ACGCTCTACGGCGGCACCCAGCTGGCAGACCGCTATCGCGCCTTTAACCTTGGGGTGGGGAAAAACATGGGCTATTTCGG
CGCCCTGTCGCTGGATATCACTCAGGCCAACGCCACCCTGGCTGACGACAGCGAACATCAGGGGCAGTCGGTGCGTTTTC
TCTATAACAAATCCCTGGATGAGACCGGCACCAACCTGCAGCTGGTGGGCTACCGCTACTCTACCCGCGGCTATTATAAC
TTTGCCGATACCACTTACCGCCGGATGAGCGGCTACAGTGTGGAAACCCAGGACGGCGTTATCCAGGTAAAACCGAAATT
TACCGACTACTACAATCTGGCTTACAGCAAGCGCGGCAAGGTGCAGCTGAGCGTGACTCAGCAGTTGGGGCGCACCGCCA
CCCTCTATCTCAGCGGTAGCCACCAGACCTACTGGGGCACCGACGATGCCGATGAGCAGCTGCAGGCCGGCCTCAACGCC
GCCGTGGACGATATCAACTGGTCGCTAAGCTACAGCCTGACAAAAAACGCCTGGCAGCAGGGGCGCGATCAAATGCTGGC
GATCAATATCAATATCCCCTTCAGCCACTGGCTGCGTTCCGACAGCCGCTCGGTCTGGCGGCACGCCAGCGCCAGCTACA
GCCTGTCGCACGATCTCAATGGCCGCATGACCAATCTGGCGGGCCTGTACGGCACCCTGCTGGAAGACAACAACCTCAGC
TATAGCGTGCAGACCGGCTATGCCGGCGGCGGCAACGGCGACAACGGGAGCACAGGCTACACCGCCCTCAACTACCGCGG
CGGCTACGGCAACGCCAACGTCGGCTACAGCCGCAGCGATGGCTTTAAACAGCTCTACTACGGGGTCAGCGGCGGCGTGC
TGGCGCACGCCAACGGCATCACCCTGAGCCAACCGTTAAACGATACCGTGGTGCTGGTGAAAGCCCCCGGCGCCGGCGGC
GTGAAAGTGGAAAACCAGACCGGGGTACGCACCGACTGGCGCGGGTATGCCGTCCTGCCTTATGCCACTGAGTATCGCGA
AAACCGGATCGCGCTGGATACCAACACCCTGGCGGACAATGTCGACCTTGACGATGCGGTGGTCAGCGTGGTGCCCACCC
ATGGGGCGATTGTCCGCGCCAACTTCAACGCCCAGGTAGGGATGAAGATCCTGATGACGCTGACCCATCGCGGCAAACCG
GTGCCGTTTGGCGCCCTCGCCACCGGCGACAGCAACCAGAGCGGCAGCATCGTCGCGGACAACGGCCAGGTCTACCTGAG
CGGGATGCCGCTGGCGGGCAAAGTGCGGGTGAAATGGGGCGATGGCCCGGACGCTCAGTGCGTGGCCGATTACCGTCTGC
CGCCGGAGAGCCAGCAGCAGGCGCTCAGTCAGCTTTCGGTCGCGTGCCGCTAA

Protein sequence :
MSHRKYGLDHLGCRTARRLVSPALALWLCSQPFAARADLYFNPRFLADDPAAVADLSGFEKGQEVPPGTYRVDIYLNNGF
MTTRDVTFQADAQGHGLSPCLTRGQLASMGVDTGRVPGMATLDSTACVPLTTLISEATTRFDVGQQRLYLTVPQAFMGNH
ARGYIPPELWDNGITAGLINYNFTGNNAHNTTGGSSRYAYLNLQSGLNIGAWRLRDNSTWSYSSGGSTSSNENRWQHVNS
WLERDITPLRSRLTLGDSYTNGDVFDGINFRGAQLASDDNMLPDSQKGFAPVIHGIARGTAQVSIRQNGYEIYQSTVPPG
PFTIDDLYAAGNGGDLQVTIKEADGSRQVFSVPWSTVPVLQREGHTRFALTAGEYRSGNSQQETPDFFQGTAMHGLPAGW
TLYGGTQLADRYRAFNLGVGKNMGYFGALSLDITQANATLADDSEHQGQSVRFLYNKSLDETGTNLQLVGYRYSTRGYYN
FADTTYRRMSGYSVETQDGVIQVKPKFTDYYNLAYSKRGKVQLSVTQQLGRTATLYLSGSHQTYWGTDDADEQLQAGLNA
AVDDINWSLSYSLTKNAWQQGRDQMLAININIPFSHWLRSDSRSVWRHASASYSLSHDLNGRMTNLAGLYGTLLEDNNLS
YSVQTGYAGGGNGDNGSTGYTALNYRGGYGNANVGYSRSDGFKQLYYGVSGGVLAHANGITLSQPLNDTVVLVKAPGAGG
VKVENQTGVRTDWRGYAVLPYATEYRENRIALDTNTLADNVDLDDAVVSVVPTHGAIVRANFNAQVGMKILMTLTHRGKP
VPFGALATGDSNQSGSIVADNGQVYLSGMPLAGKVRVKWGDGPDAQCVADYRLPPESQQQALSQLSVACR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2D AFH78429.1 putative fimbrial usher protein Virulence KpGI-5 Protein 0.0 81
sfaF CAC16953.2 SfaF protein Virulence PAI III 536 Protein 0.0 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A79E_0816 YP_006634647.1 type 1 fimbriae anchoring protein FimD VFG0876 Protein 0.0 80
A79E_0816 YP_006634647.1 type 1 fimbriae anchoring protein FimD VFG1645 Protein 0.0 67
A79E_0816 YP_006634647.1 type 1 fimbriae anchoring protein FimD VFG0912 Protein 0.0 67
A79E_0816 YP_006634647.1 type 1 fimbriae anchoring protein FimD VFG0446 Protein 1e-172 49
A79E_0816 YP_006634647.1 type 1 fimbriae anchoring protein FimD VFG0454 Protein 5e-156 44