Gene Information

Name : A79E_4479 (A79E_4479)
Accession : YP_006638239.1
Strain : Klebsiella pneumoniae 1084
Genome accession: NC_018522
Putative virulence/resistance : Unknown
Product : type IV secretory pathway, VirB4 component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4750398 - 4753028 bp
Length : 2631 bp
Strand : +
Note : -

DNA sequence :
ATGAATGAACGGTGCGGTCTCCCGCAACAGGCGCTGAATACCAGCTACCGCAAGGGCCCGTCCTTTGTCGACTGGCTGCC
GTGGGTGGAGTTTTTGCCGGAGTCGCAGACGCTGCTGCTGGAAGATGGCCGCTCGGTGGGCGCGGTGTTTGAGCTAATAC
CTGTTGGCACCGAAGGCCGCTCGACGGCCTTTCTCGAACAGATGCGCGATACCGTCACCGACGCATTACAGGATGCCTTT
GATGAGCATGAACGTGCGCCGTGGGTGGTGCAGTTTTTCTGCCAGGACGAGGACGACAGCGAGGCGTGGCTGGCATCACT
TTCAGCTTACGCCGCACCGGAAATTCGCAACTCCGCCTTTACCCGCGAATGGCTCACGCAGATGGCAAACCATATGGCGA
ATCTCACCCGCGATGAGGGGCTGTTTCTCGATAACACCGTCACCCGTACCCGGTGGCGGGCGACGTGGCGGCGCACGCGG
ATGGTGGTGTACCGCTGGCTTCCAGGTTTCTCGCCGGACGAACCGTCCCCGGAAGAGACGCTGAACAATATCTGCGAGCG
TCTCACCGCCGGGCTGAAAGCGGCGGGAATTAACGCCATCCGCCAGAATGAACAGGCCATTCACCGCTGGATGGTGCGCT
GGTTTAATCCTGCGCCTCCAGTGGAAGATAAAAAAGCCTTCTGGCGACAACTGGATTTACCGGAAGCTGAATCTCTGCCC
GTTATCACCGATTTCGCTGAACGACTGCTGACGAGCGAACCGCGCTCGGACGCAAAGAACGGCGTTTGGTGGTTGGATAA
CCGACCGCATAAAGTGATGGTGGTCGACCGCCTGCGCAAAGCGCCGCCGCCCGGCCTGCTGACCGGAGAAACCTCGCGCG
GCGACGGCATCAATGCCCTGTTCGACCTGCTGCCTGCGGGAACCATCATAAACCTGACCGTAGTGGTGTATCCGCAGGAC
AAGCTGGAGCAGCATATCAGCCACCTCGCCGACCGGGCGATTGGCGACAACACCGATTCGGAATACACCCGCCGCGACTG
CCACGAGGTACGCAGCTATCTCAAGGACGGCCATAAGCTCTACCGCAGCACGCTGGCGTTTTACCTGCATGCACCCGACA
CCGATACCCTGTTTCGCCAGCAGCGCCAGTTGCACAGCCTGTTGCTTAACGCCGGTCTGGTACCCGTACAGGAGCAGCAT
GAAGTGGCCCCCTTAAGCCACTGGTTACGCTGGCTGCCGATGTGTTTCGATCCCCTGCGCGATCTGTGCGGGCTGTATAC
CCGGCTCAACTTCGTTCAGCATATCGCCGGGCTGATGCCGGTGTACGGGCGGGAAACCGGCACCGGGCATCCGGGGATTT
GTTACTTCAATCGCGGCGGCGCGCCGCTGTGCTTCGATCCGCTGAATAAGCTAGACCGCGCCCAGAACGGCCATCTGCTG
TTGCTCGGCCCGACCGGAGCGGGCAAATCCGCCACGCTGAACGCGAAAATAGCCCAATTGATGGCACTGCACCGCCCTCG
CCTGTTTATCATCGAAGCCGGGAACTCGTTCGGCCTGATGGCGGACTACGCTGCCGCCCACGGTCTGACGGTGAACAAAA
TCAACCTGCGTCCCGGTTCCGGTGTCACCCTGCCCCTGTTCGCCGATGCCTGGCGACTGGTGGAACAGGCGGTCACCGAC
GCCGAACCACCGGAAGATGAAGAGAGCGACGGCGATGACCAGCGTGACGTGCTCGGTGAAATGGAGATCACCGCCCGGCT
GATGATCACCGGTGGCGAGGCGAAAGAAGATGCACGCCTCACCCGGCCAGACATGGCGATGATCCGTCAGGCGATTATCG
CTGCCGCACATACCTGTTATCAGGAAAAACGCCAGACGCTAACGCAGGATATCCGCGATGCACTGTTCGCCCTTTCCCGC
GACAACAGCCTGCCGGAAGCCCGCCGCCAGCGGGCGTATGAAATGGCGGAGTCCATCAACCTGTTCTGCGCCGGATTTGA
AGGCGAACTGTTTAACCGTGAAGGCCAGATGTGGCCGGAGACGGATATAACTCTGGTCGATCTCGCCACCTTCGCCCGTG
AGGGTTACGAAGCCCAGCTTGCCATCAGCTATATCTCGCTGATTAACCATATCAATAACCTCGGCGAACGCGACCAGCAT
CTGGTGCGACCCATCGTCAATATCACCGATGAGGCGCATATCATCACTGTTAATCCCTTATTGGCGCGCTTTCTCACCAA
AGGCTCGAAGATGTGGCGCAAGCTCGGTATCTGGCTGTGGCTCGCCACCCAGAACCTGGCAGATTTTCCTGATGAGGCGA
AGAAGCTGCTCAATATGATCGAGTGGTGGGAACTGCTGGTGATGCCGCCGGAAGAGATCGAGCAGGTCTGCCGATTTAAA
GCGCTGACGGAAGAACAGCGCCAACTGCTGCGCTCAGCGGTAAAATCGCCGGGGCAGTATACCGAGGGCGTGGTGCTGTC
GCCGCGCGTGGAGGCGCTGTTTCGGGTGGTGCCGCCAGCGCTGTATCTGGCGCTGGCCATGACTGAGAAGCATGAGAAGG
CCGAGCGGAGGCGGATTATGCAGGAGACGGGGTGTAGTGAGGTGGAGGCGGCTATGAAATTTAAGTTCTAA

Protein sequence :
MNERCGLPQQALNTSYRKGPSFVDWLPWVEFLPESQTLLLEDGRSVGAVFELIPVGTEGRSTAFLEQMRDTVTDALQDAF
DEHERAPWVVQFFCQDEDDSEAWLASLSAYAAPEIRNSAFTREWLTQMANHMANLTRDEGLFLDNTVTRTRWRATWRRTR
MVVYRWLPGFSPDEPSPEETLNNICERLTAGLKAAGINAIRQNEQAIHRWMVRWFNPAPPVEDKKAFWRQLDLPEAESLP
VITDFAERLLTSEPRSDAKNGVWWLDNRPHKVMVVDRLRKAPPPGLLTGETSRGDGINALFDLLPAGTIINLTVVVYPQD
KLEQHISHLADRAIGDNTDSEYTRRDCHEVRSYLKDGHKLYRSTLAFYLHAPDTDTLFRQQRQLHSLLLNAGLVPVQEQH
EVAPLSHWLRWLPMCFDPLRDLCGLYTRLNFVQHIAGLMPVYGRETGTGHPGICYFNRGGAPLCFDPLNKLDRAQNGHLL
LLGPTGAGKSATLNAKIAQLMALHRPRLFIIEAGNSFGLMADYAAAHGLTVNKINLRPGSGVTLPLFADAWRLVEQAVTD
AEPPEDEESDGDDQRDVLGEMEITARLMITGGEAKEDARLTRPDMAMIRQAIIAAAHTCYQEKRQTLTQDIRDALFALSR
DNSLPEARRQRAYEMAESINLFCAGFEGELFNREGQMWPETDITLVDLATFAREGYEAQLAISYISLINHINNLGERDQH
LVRPIVNITDEAHIITVNPLLARFLTKGSKMWRKLGIWLWLATQNLADFPDEAKKLLNMIEWWELLVMPPEEIEQVCRFK
ALTEEQRQLLRSAVKSPGQYTEGVVLSPRVEALFRVVPPALYLALAMTEKHEKAERRRIMQETGCSEVEAAMKFKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 56
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 56
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 56
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 56
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 0.0 55
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 54
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 54
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 53
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 51
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 50
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 50
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 50