Gene Information

Name : A79E_4190 (A79E_4190)
Accession : YP_006637958.1
Strain : Klebsiella pneumoniae 1084
Genome accession: NC_018522
Putative virulence/resistance : Virulence
Product : type IV fimbrial assembly, ATPase PilB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4439260 - 4440645 bp
Length : 1386 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAACAGAACAGCTGATCCCCCTCTGCCGTCGCTACCACGCCATGCTGCTGCATAGCGATGAACAGACAATCTCTAT
TGCGGTGGTTAATACCCCGCCGGCGGAGTTAATGGAGGCGCTACGCTTCGCGACGCAAAAGCGGATCGACATTGAATGCT
GGAGCCAGGAGCAGATGGATAAGCGTCTGCAGGCCCAGGAAAAGCAGGCGCAACTGGCGCAGAACGACGGGCCGGAAAAT
ATCGCCGAACGGGTCAACCAGATCCTCGAACAGGCCCTGCGTCAGCGGGCGTCTGATATTCATATCGAGCCCACGGAAAC
GCACTTACGCATCCGCCTGCGGGTCGATGGCGTCCTTCACGCCCTACCGTTGCTGGCTCCCGAACTGGCCGCACCGGTTA
TCGCGCGACTCAAGGTCCTGGCCAGTCTCGATATCGCCGAGCACCGTTTACCGCAGGATGGCCAGTTCGCGCTGAATCTT
GCGGGACGACCGCTCTCTTTTCGCATCGCCACTCTGCCCTGCCGCTATGGCGAAAAGATTGTCCTGCGCCTTCTGCATCA
GGTTGACCAGGCGCTGGATCTGGAAGCACTCGGACTCTCATCCTCCCAGTTGGCGGCCTTTCGCCAGGCGCTGAACCAGC
CGCAGGGTCTGCTGCTGGTCACCGGCCCAACCGGAAGCGGGAAAACGGTGACCCTCTACAGCGCCCTGCAGGCCAGAAAC
CGTGAGCAAGTGAATATCTGTAGCGTGGAGGATCCACTGGAGATCCCCATCGCCGGGATGAACCAGACGCAAATCAATCC
CCGCGCCGGACTCACTTTTCACAGTGTGCTGCGCGCCCTGTTACGCCAGGATCCGGATATTGTCATGGTGGGCGAGATCC
GCGATGCCGAGACCGCTGAAATCGCGCTCAAAGCCGCCCAGACCGGTCATCTGGTGCTCTCCACCCTGCACACCAATTCC
ACCAGCGAAACCCTGACCCGCCTGCAGCAAATGGGCATCGCCCGCTGGATGATTTCCTCTGCGCTCTCGCTGGTCATCGC
CCAGCGTCTGGTCCGCAAGCTGTGTCCCCACTGTCGGCGTAATGCCGGCAGCGCCGCCGACCTGCCGCACAGCCTGTGGC
CCCGCCCGCTGCCACGCTGGCAGGCAGCGGGCTGCGAACATTGTTACCACGGATATTACGGCCGGCTGGCGCTGTTCGAA
GTGCTGCCTGTTACCCCCGGGCTACGCCAGGGGATAGTCCAGGGACTTAACGCCATTGAGATTGAATCTCTGGCGCGAGC
CGCAGGGATGATGACGCTTTTTGAAAGCGGCTGTCAGGCTATCGAACAGGGATTGACCAGCCTCGAAGAGGTGGTGCGGG
TGCTGGGGATCCCCCATGGCGACTAA

Protein sequence : 
MKTEQLIPLCRRYHAMLLHSDEQTISIAVVNTPPAELMEALRFATQKRIDIECWSQEQMDKRLQAQEKQAQLAQNDGPEN
IAERVNQILEQALRQRASDIHIEPTETHLRIRLRVDGVLHALPLLAPELAAPVIARLKVLASLDIAEHRLPQDGQFALNL
AGRPLSFRIATLPCRYGEKIVLRLLHQVDQALDLEALGLSSSQLAAFRQALNQPQGLLLVTGPTGSGKTVTLYSALQARN
REQVNICSVEDPLEIPIAGMNQTQINPRAGLTFHSVLRALLRQDPDIVMVGEIRDAETAEIALKAAQTGHLVLSTLHTNS
TSETLTRLQQMGIARWMISSALSLVIAQRLVRKLCPHCRRNAGSAADLPHSLWPRPLPRWQAAGCEHCYHGYYGRLALFE
VLPVTPGLRQGIVQGLNAIEIESLARAAGMMTLFESGCQAIEQGLTSLEEVVRVLGIPHGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 8e-73 48
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-73 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A79E_4190 YP_006637958.1 type IV fimbrial assembly, ATPase PilB VFG2048 Protein 9e-75 49
A79E_4190 YP_006637958.1 type IV fimbrial assembly, ATPase PilB VFG2426 Protein 5e-72 47
A79E_4190 YP_006637958.1 type IV fimbrial assembly, ATPase PilB VFG0182 Protein 5e-69 47