|
Name : A79E_4137 (A79E_4137) Accession : YP_006637907.1 Strain : Klebsiella pneumoniae 1084 Genome accession: NC_018522 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 4385209 - 4386702 bp Length : 1494 bp Strand : + Note : - DNA sequence : ATGACGCCAGCCGCCGAACGCCGTCCGCTGTTGCCCTTCGCCTGGGCCCGCGCGCACCATCTTGTGCTGCTCAGCGACGG CGAATGCTGCGAAGCGCTGTGCCGCCCCGATACCGCCGCCCGGGCGCTGCTGGAAGCGCGCCGCCTGGCGGACGGGCCGA TGCGCGTCAGCCGTCTGGCGCCGGAGGCATTCGAGAAAGTGCTGGTGCTCAGCTATCAGCGTGATTCGGCGGAGGCGCAC CGCATGATGGCCGACATCGGCAATGAGCTCGACCTCTATACCCTCGCCGAAGAGCTACCGGACACCGACGATCTGCTCGA CAGCGAGGACGACGCGCCGATCATCCGCCTGATCAACGCCATGCTCACCGAGGCCATCAAAGAGAAAGCCTCGGATATTC ATATCGAAACCTACGAGCGCCATCTGCAGATCCGCTTTCGCGTCGACGGCGTGCTGCGGGAAATTCTGCGCCCGCAGCGG CGGCTGGCCGCCCTGTTAATTTCCCGCATCAAGGTGATGGCCAGCCTGGACATTGCCGAAAAGCGGGTCCCTCAGGATGG CCGCATGGCGCTGCGCATCGGCGGGCGAGCAATCGACGTGCGCGTCTCCACCCTGCCCTCCAGCCACGGCGAACGCGTCG TCCTGCGTCTGCTGGACAAAAACAGCGTCAACCTGGATCTGCTGACGCTGGGCATGCCGCCCGCCCTGCTCGATCGGGTC GATGCGCTGATCGCCCGCCCGCACGGCATCATCCTTGTCACCGGTCCGACCGGCTCCGGGAAAAGCACGACGCTCTACGC CGCCCTCAGCCGCCTCGACGCCCGGGAGCGCAACATCATGACCATTGAAGATCCGGTGGAGTATGAGCTGGAGGGCATAG GCCAGACTCAGGTCAACGCCAAAGTCGAGATGACCTTCGCCCGCGGCCTGCGCGCCATCCTGCGCCAGGATCCGGACGTA GTGCTGGTGGGCGAAATCCGCGATGGCGAAACCGCCCAGATCGCCGTTCAGGCCTCGCTGACCGGGCACCTGGTGCTGTC GACCCTGCACACCAACAGCGCGCTGGGCGCCATTTCCCGTCTACAGGATATGGGCGTGGAGCCGTTTTTACTCTCCACCT CGCTGCTGGCGGTGATGTCGCAGCGGCTGGTGCGCCAACTGTGCCCACACTGCCGTCAGCCCTGGCAGGCGGATGCCAAC ACCGCCCGGCAGATGGCGGTCCCGGTCGGCGCGCGGCTGTGGCAGCCCAAAGGCTGTCCGGAGTGTAATTTCATCGGCTA TCGCGGACGCACCGGTATTCATGAACTGCTGCTGGTTGACGACCGCGTCCGCGCCGCCATCCACCGCGGCGAGAATGAGA TCACTCTGATCCAGCAGCTGGGGCCAGCCTGGCAAACCCTGCGCCATGCCGGACGCGACAAAGCGCTGGCGGGGATCACC AGCTGGGAGGAGGTGATGCGGGTCACCGAACAGCAAACGACGGAAAGCGTCTAA Protein sequence : MTPAAERRPLLPFAWARAHHLVLLSDGECCEALCRPDTAARALLEARRLADGPMRVSRLAPEAFEKVLVLSYQRDSAEAH RMMADIGNELDLYTLAEELPDTDDLLDSEDDAPIIRLINAMLTEAIKEKASDIHIETYERHLQIRFRVDGVLREILRPQR RLAALLISRIKVMASLDIAEKRVPQDGRMALRIGGRAIDVRVSTLPSSHGERVVLRLLDKNSVNLDLLTLGMPPALLDRV DALIARPHGIILVTGPTGSGKSTTLYAALSRLDARERNIMTIEDPVEYELEGIGQTQVNAKVEMTFARGLRAILRQDPDV VLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSALGAISRLQDMGVEPFLLSTSLLAVMSQRLVRQLCPHCRQPWQADAN TARQMAVPVGARLWQPKGCPECNFIGYRGRTGIHELLLVDDRVRAAIHRGENEITLIQQLGPAWQTLRHAGRDKALAGIT SWEEVMRVTEQQTTESV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-121 | 64 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-121 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A79E_4137 | YP_006637907.1 | general secretion pathway protein E | VFG2048 | Protein | 2e-121 | 64 |
| A79E_4137 | YP_006637907.1 | general secretion pathway protein E | VFG1876 | Protein | 6e-116 | 63 |
| A79E_4137 | YP_006637907.1 | general secretion pathway protein E | VFG0182 | Protein | 3e-124 | 59 |
| A79E_4137 | YP_006637907.1 | general secretion pathway protein E | VFG2426 | Protein | 7e-75 | 47 |
