Gene Information

Name : A79E_1730 (A79E_1730)
Accession : YP_006635540.1
Strain : Klebsiella pneumoniae 1084
Genome accession: NC_018522
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding protein SitA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1866776 - 1867690 bp
Length : 915 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTCAACTAAAGACGGTAAAGATAATCCTGTTAAGCACCTTTATCACAGGACTGACAGCTATTCATGGCGCTTATGC
TGCTGAAAAGTTTAAGGTCATCACGACATTCACGGTAATTGCTGACATGGCACAGAACGTGGCAGGGGACGCCGCCGAAG
TCAGTTCGATTACCCGGCCTGGCGCAGAAATCCATGAATATCAGCCTACAACCGGAGATATAAAGCGTGCTCAGGGGGCA
CAGCTAATCCTTTCAAATGGCTTCAACCTCGAACTCTGGTTTCAAAAATTTTATCAACGATTGAAAAACGTACCGGATGT
GGTGGTCACTACAGGTATCACTCCAATAAGCATTACCGAGGGTCCGTATGATGGAAAACCAAATCCTCATGCCTGGATGT
CGCCTGATAATGCACTGATTTATGTAGATAATATTCGTGATGCGCTGGTGAAATACGATCAGGGAAATGCTGAAACTTAC
AAAGCCAATGCGGACGCCTATAAACAAAAGATCCGTCAGACGCTTGAACCGCTGCGTAAACAAATAGAAACCCTCCCTGC
CGAACAGCGCTGGCTGGTATCGAGCGAAGGCGCATTTTCTTATCTGGCACGCGATCTGGGACTGAAAGAACTCTATCTAT
GGCCGATTAATGCCGATCAACAGGGAACCCCGCAACAGGTTCGTAACGTAATCGATAAAGTCCGGCAGAATAAAATTCCG
GCGGTATTTAGCGAAAGTACCGTTTCCAATAAACCAGCCCGTCAGGTCGCACGCGAAACAGGTGCACATTATGGGGGCGT
ACTTTATGTGGATTCCCTGAGCGCAGCAAATGGCCCGGTTCCCACCTACCTTGATCTGCTGAACGTCACTACCCGGACAG
TGGTACAGGGTTTGCACAGCGGAATGAAGGAGTAA

Protein sequence : 
MLQLKTVKIILLSTFITGLTAIHGAYAAEKFKVITTFTVIADMAQNVAGDAAEVSSITRPGAEIHEYQPTTGDIKRAQGA
QLILSNGFNLELWFQKFYQRLKNVPDVVVTTGITPISITEGPYDGKPNPHAWMSPDNALIYVDNIRDALVKYDQGNAETY
KANADAYKQKIRQTLEPLRKQIETLPAEQRWLVSSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRNVIDKVRQNKIP
AVFSESTVSNKPARQVARETGAHYGGVLYVDSLSAANGPVPTYLDLLNVTTRTVVQGLHSGMKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-110 74
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-111 74
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 9e-111 74
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-110 74
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-110 74

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A79E_1730 YP_006635540.1 manganese ABC transporter substrate-binding protein SitA BAC0349 Protein 5e-111 74
A79E_1730 YP_006635540.1 manganese ABC transporter substrate-binding protein SitA BAC0439 Protein 3e-91 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A79E_1730 YP_006635540.1 manganese ABC transporter substrate-binding protein SitA VFG0525 Protein 5e-111 74