Gene Information

Name : A79E_1729 (A79E_1729)
Accession : YP_006635539.1
Strain : Klebsiella pneumoniae 1084
Genome accession: NC_018522
Putative virulence/resistance : Virulence
Product : manganese ABC transporter, ATP-binding protein SitB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1865951 - 1866772 bp
Length : 822 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCCAGGCGGCAGGCATCACAGTAGCGGGCTTAACTGTTGTTTATCGTAACGGCCATGAGGCATTACAGAATGCATC
ATTCAGCGTCCCTAAAGGTTCGAACGCGGCCCTGCTGGGGGTAAATGGTTCCGGAAAATCCACACTATTCAGGGCAATGA
TGGGATTCGTATCCCCTTCATGCGGAACGATTTCACTTCTCGGGATGCCTCCTGCACAGGCGCTTCGCCGCAATATTATT
GCCTATGTACCTCAGTCCGAGGAAATTGACTGGTCGTTCCCGGTATTGGTGGAAGATGTCGTCATGATGGGCCGGTATGG
CCATATGGGTATGCTGCGTAGAGCGGGTAAAGAAGATCGCAGGATCGTTAATGATGCGCTTGAGCGTGTAGATATGCTTC
CTTACCGCCACCGGCAGATTGGTGAATTATCCGGAGGGCAAAAGAAGCGGGTGTTCCTCGCGCGTTCTATTGCACAACGG
GGCAAAGTAATCCTTCTTGATGAGCCTTTTACCGGTGTGGATGTCAATACCGAAAAGAAAATCATCACGCTGCTTGGCGA
ACTGAAAGAAGAAGGCAGCACCCTGGTGGTTTCAACGCATAACCTTACCTCCGTATCCGAATATTGTGATTATACCGTTC
TGGTGAAAGGCACCGTGCTGGCAAGCGGTCCTGTCGCCACGACATTTACGCCGGAAAATATAAAAAAGACGTTTAGTGCA
AACATTGAGAGTGAGTCAGATATATTGCCAGTTCAGGGAGGATCAACACAGCCAAATTATCAACCTTCCGCTGAATATGA
AGATAAAGGCAGGTCATCATGA

Protein sequence : 
MSQAAGITVAGLTVVYRNGHEALQNASFSVPKGSNAALLGVNGSGKSTLFRAMMGFVSPSCGTISLLGMPPAQALRRNII
AYVPQSEEIDWSFPVLVEDVVMMGRYGHMGMLRRAGKEDRRIVNDALERVDMLPYRHRQIGELSGGQKKRVFLARSIAQR
GKVILLDEPFTGVDVNTEKKIITLLGELKEEGSTLVVSTHNLTSVSEYCDYTVLVKGTVLASGPVATTFTPENIKKTFSA
NIESESDILPVQGGSTQPNYQPSAEYEDKGRSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-80 70
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-80 70
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-80 70
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-80 70
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-80 70

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A79E_1729 YP_006635539.1 manganese ABC transporter, ATP-binding protein SitB BAC0350 Protein 9e-81 70
A79E_1729 YP_006635539.1 manganese ABC transporter, ATP-binding protein SitB BAC0440 Protein 3e-70 59
A79E_1729 YP_006635539.1 manganese ABC transporter, ATP-binding protein SitB BAC0400 Protein 6e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A79E_1729 YP_006635539.1 manganese ABC transporter, ATP-binding protein SitB VFG0526 Protein 8e-81 70