Gene Information

Name : A79E_1727 (A79E_1727)
Accession : YP_006635537.1
Strain : Klebsiella pneumoniae 1084
Genome accession: NC_018522
Putative virulence/resistance : Virulence
Product : manganese ABC transporter, inner membrane permease protein SitD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1864273 - 1865100 bp
Length : 828 bp
Strand : -
Note : -

DNA sequence : 
ATGCTGAATATGCTCATTGAACCTTTCCGCTTTGACTTCATCAATTATGCCCTGATAATCGCGCTGCTGGTCTCTGTTCC
CTGCGCCCTGCTGTCTGTTTTTCTCGTGCTGAAAGGTTGGGCTCTGATGGGGGATGCCATGAGCCATGCCGTGTTTCCCG
GGGTTGTACTGGCCTGGATTGTAGGGTTGCCATTAGGCACCGGAGCTTTTGTGGCTGGATTATCCTGTGCTTTACTTACC
GGATATATTAAAGATAACAGCCGCATAAAGCAGGATACGCTGCTGGGTATCATTTTTTCGGGTATGTTCGCCTCCGGACT
GATTTTGTATGTCTCAGTCCGTCCGGATGCTCCGCTTGAACATATCCTCTTTGGCGACATGCTTGGTATAAACGCCACCG
ACATACTCCAGACGGGCACCATTGCCTTATTTATACTGCTGATTACCGGAATTAAATGGCGTGATTTCCTGCTTTACTGT
TTTGATATTCAGCAGGCCAGGGTCAGTGGACTACGGACGGGATGGCTCTATTACGGATTACTGAGCATGATTTCGCTTAC
TGTTGTCGCCACGCTAAAGTCCGTGGGGATTATTTTATCCGTCTCTTTGCTTATCGCGCCCGGTGCTATTGCAGTTCTTT
TGACGCAACGATTTAGCAACGCATTATTCATCGCTGTGGCTTTATCGGCTCTGGTATCAACGACCGGCGTTTACCTCTCT
TATTTCATTGATAGTGCGCCTGCGCCAACGGTTGTTTTGCTTTTTGCCCTGATATTTATAGTTATTTTTATATACTCAAG
CTTTAAATATAATGAGAAATATCTCTGA

Protein sequence : 
MLNMLIEPFRFDFINYALIIALLVSVPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAWIVGLPLGTGAFVAGLSCALLT
GYIKDNSRIKQDTLLGIIFSGMFASGLILYVSVRPDAPLEHILFGDMLGINATDILQTGTIALFILLITGIKWRDFLLYC
FDIQQARVSGLRTGWLYYGLLSMISLTVVATLKSVGIILSVSLLIAPGAIAVLLTQRFSNALFIAVALSALVSTTGVYLS
YFIDSAPAPTVVLLFALIFIVIFIYSSFKYNEKYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-78 68
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-78 68
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-78 68
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-78 68
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-78 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A79E_1727 YP_006635537.1 manganese ABC transporter, inner membrane permease protein SitD BAC0352 Protein 7e-79 68
A79E_1727 YP_006635537.1 manganese ABC transporter, inner membrane permease protein SitD BAC0442 Protein 1e-58 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A79E_1727 YP_006635537.1 manganese ABC transporter, inner membrane permease protein SitD VFG0528 Protein 6e-79 68