Gene Information

Name : A79E_1018 (A79E_1018)
Accession : YP_006634847.1
Strain : Klebsiella pneumoniae 1084
Genome accession: NC_018522
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding protein SitA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1043611 - 1044528 bp
Length : 918 bp
Strand : -
Note : -

DNA sequence : 
ATGCTACACCTGACACCGCTGAAATCATTGCTGCTGGCCAGCGCGCTGGCTCTGCTGGCCGCGACGCCGGCCACCGCGCA
GGAGAAATTCAGGGTTATCACCACCTTCACGGTTATCGCCGATATGGCGCAGAACGTGGCCGGCGACGCCGCCGACGTGA
GCTCCATTACTAAACCGGGCGCGGAGATCCATGATTACCAGCCCACGCCCGGCGATATCAAACGCGCGCAGGGGGCGCAG
CTGATCCTCAGCAATGGGCTTAATCTCGAACGGTGGTTTGCCCGTTTTTATCAGCACTTACAGGGCGTTCCGGAGGTGGT
GGTCAGCGAGGGGATCCAGCCGATGGGCATCAGCGCGGGCCCCTATAGCGGGAAGCCCAATCCCCATGCCTGGATGTCGG
CAGATAACGCCCTGATCTATGTCGATAACATTCGCGATGCGCTGGTGAAGTACGATCCGCCTCACGCCGACACCTATCGC
CGTAACGCCGAGGCCTACAAAGAGAAGATCCGTCAGACGATGGCGCCGCTGCAGGCCAGACTGGCGCAGCTGCCGGCGGA
TAAGCGCTGGCTGGTCACCAGCGAGGGAGCCTTCTCCTATCTGGCCCGCGACTATGGCCTGCGCGAACTGTATCTGTGGC
CGATCAATGCCGACCAGCAGGGCACCCCGCAACAGGTGCGCAAGGTTATCGACACCATGAAGAAAGAACGCATCCCGACC
ATCTTCAGCGAAAGCACCATCTCCGATAAACCGGCGCGTCAGGTGGCGCGGGAAGCCGGGGCCCACTACGGCGGCGTGCT
GTATGTCGATTCGCTGAGCGCCGCCGACGGCCCGGTGCCGACCTGGCTCGACCTGCTGCGCGTCACCACCGAAACCATCG
TCAACGGTATCCAGGACGGGATGAGGAAGCAGCCATGA

Protein sequence : 
MLHLTPLKSLLLASALALLAATPATAQEKFRVITTFTVIADMAQNVAGDAADVSSITKPGAEIHDYQPTPGDIKRAQGAQ
LILSNGLNLERWFARFYQHLQGVPEVVVSEGIQPMGISAGPYSGKPNPHAWMSADNALIYVDNIRDALVKYDPPHADTYR
RNAEAYKEKIRQTMAPLQARLAQLPADKRWLVTSEGAFSYLARDYGLRELYLWPINADQQGTPQQVRKVIDTMKKERIPT
IFSESTISDKPARQVAREAGAHYGGVLYVDSLSAADGPVPTWLDLLRVTTETIVNGIQDGMRKQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 4e-108 84
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 4e-108 84
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-108 84
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-108 84
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 4e-108 84

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A79E_1018 YP_006634847.1 manganese ABC transporter substrate-binding protein SitA BAC0349 Protein 2e-108 84
A79E_1018 YP_006634847.1 manganese ABC transporter substrate-binding protein SitA BAC0439 Protein 1e-85 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A79E_1018 YP_006634847.1 manganese ABC transporter substrate-binding protein SitA VFG0525 Protein 2e-108 84