Gene Information

Name : A79E_1017 (A79E_1017)
Accession : YP_006634846.1
Strain : Klebsiella pneumoniae 1084
Genome accession: NC_018522
Putative virulence/resistance : Virulence
Product : manganese ABC transporter, ATP-binding protein SitB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1042793 - 1043614 bp
Length : 822 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGCAGCGCAAGCGGGACTGTATGTCAACCAGCTCACCGTCACCTGGCGCAACGGCCACACTGCCCTGCGCGACGC
CTCGTTCAGCGTGCCGCGCGGCTCCATTGCCGCGCTGGTAGGCGTTAACGGCTCGGGTAAATCCACGCTGTTTAAAGCGC
TGATGGGCTTTGTGCGCGTCGGCCACGGCGAGATCGCCATACTCGGCCAGCCGGTCAACCGCGCACTGCGCCAAAACCTG
GTCGCCTATGTCCCGCAGTCGGAAGAGGTGGACTGGTCCTTCCCGGTGCTGGTGGAGGATGTGGTGATGATGGGCCGCTA
CGGCCATATGGGCTGGCTGCGGCGGGCAAAGCCGCGCGATCGCGAGATTGTCGATGCCGCGCTGGCCCGCGTGGGCATGA
GCGAGTTCCGCCATCGGCAGATTGGCGAGCTCTCCGGCGGGCAGAAAAAGCGCGTCTTTCTTGCCCGCGCCATCGCTCAG
CAGGGTCAGGTGATCCTGCTGGATGAACCTTTCACCGGCGTCGATGTGCAGACCGAAGCGCGGATCATCAGCCTGCTGCG
CGAGCTCCGCGATGAGGGCTGTACCATGCTGGTCTCCACCCACAACCTCGGGTCAGTTAGTGAATTTTGTGATTATACGG
TGATGGTGAAAGGCACCGTGCTGGCCAGCGGCCCGACAGAAACCACCTTCACTGCCGAGAATCTGGAGCGGGCTTTCAGC
GGCGTGCTGCGCCACGTCGCGCTCACCGGCGGGGAAGCGCAGGTTATCACCGATGACGAGCGGCCGTTTATCAGCCGGCG
CGCGGCGGGAGGCCCACGATGA

Protein sequence : 
MNAAQAGLYVNQLTVTWRNGHTALRDASFSVPRGSIAALVGVNGSGKSTLFKALMGFVRVGHGEIAILGQPVNRALRQNL
VAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKPRDREIVDAALARVGMSEFRHRQIGELSGGQKKRVFLARAIAQ
QGQVILLDEPFTGVDVQTEARIISLLRELRDEGCTMLVSTHNLGSVSEFCDYTVMVKGTVLASGPTETTFTAENLERAFS
GVLRHVALTGGEAQVITDDERPFISRRAAGGPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-107 82
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-108 82
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 8e-108 82
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-106 82
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-106 82
unnamed CAD33755.1 putative ABC transporter ATP-binding protein Virulence PAI I 536 Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A79E_1017 YP_006634846.1 manganese ABC transporter, ATP-binding protein SitB BAC0350 Protein 5e-108 82
A79E_1017 YP_006634846.1 manganese ABC transporter, ATP-binding protein SitB BAC0440 Protein 1e-78 62
A79E_1017 YP_006634846.1 manganese ABC transporter, ATP-binding protein SitB BAC0400 Protein 5e-48 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A79E_1017 YP_006634846.1 manganese ABC transporter, ATP-binding protein SitB VFG0526 Protein 4e-108 82
A79E_1017 YP_006634846.1 manganese ABC transporter, ATP-binding protein SitB VFG1496 Protein 7e-25 41