Gene Information

Name : lysS (B657_00820)
Accession : YP_006628269.1
Strain : Bacillus subtilis QB928
Genome accession: NC_018520
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 88727 - 90226 bp
Length : 1500 bp
Strand : +
Note : -

DNA sequence :
ATGAGTCAAGAAGAGCATAACCATGAAGAATTGAATGATCAGCTGCAAGTCAGACGCGATAAAATGAATCAGCTGAGAGA
TAACGGCATCGATCCATTCGGCGCACGTTTTGAAAGAACTCATCAGTCTCAAGAAGTTATTTCGGCATATCAAGATCTAA
CCAAAGAAGAGTTAGAAGAAAAAGCGATTGAAGTTACAATCGCAGGCCGCATGATGACAAAACGCGGCAAAGGAAAAGCC
GGCTTTGCCCATCTTCAGGATTTAGAAGGCCAAATCCAAATCTACGTAAGAAAAGACAGTGTCGGTGACGACCAATATGA
AATCTTCAAGTCTTCTGACCTCGGTGATCTTATCGGCGTAACCGGAAAAGTCTTCAAAACAAATGTAGGCGAATTGTCTG
TTAAAGCAACTTCCTTTGAATTGCTGACAAAAGCGCTTCGTCCGCTTCCTGACAAATACCATGGTTTAAAAGACGTTGAG
CAGCGCTACCGTCAGCGCTATCTGGATCTTATCGTAAACCCAGACAGCAAACATACGTTCATTACACGAAGCAAGATCAT
TCAAGCTATGAGAAGGTACCTTGATGATCATGGATACTTAGAAGTAGAAACACCTACAATGCACAGCATTCCTGGGGGAG
CTTCTGCACGTCCGTTTATCACTCACCACAACGCGTTAGACATTCCACTCTATATGCGTATTGCTATCGAACTGCACCTA
AAACGTCTAATTGTCGGCGGTTTAGAAAAAGTATATGAAATCGGCCGTGTTTTCCGTAACGAAGGTGTCTCTACACGCCA
TAACCCTGAATTTACAATGATTGAGTTATATGAAGCATATGCGGACTATAAAGATATCATGAGCTTAACTGAAAACCTTG
TCGCTCATATCGCCCAAGAAGTGCTTGGCACAACTACGATTCAATACGGGGAAGAGCAAATCGACCTTAAACCGGAGTGG
AAAAGAATCCATATGGTTGACGCAGTCAAAGAAGCGACCGGCGTTGATTTCTGGGAAGAGGTTACTGTTGAGCAGGCGCG
TGAATATGCAAAAGAACATGAAGTAGAAATTAAAGACTCTATGACAGTAGGCCATATCATCAACGAATTCTTCGAACAAA
AAATTGAAGAAACGCTTATTCAGCCAACGTTTATTTACGGGCATCCTGTAGAAATTTCTCCTCTTGCTAAGAAAAACCCT
GAGGACCCGCGTTTTACAGACCGTTTTGAGCTGTTTATCGTTGGCCGTGAACATGCCAACGCGTTTACAGAGCTGAATGA
TCCTATTGATCAAAGAGAACGCTTTGAAGCGCAATTAAAAGAGCGTGAAGCCGGTAATGATGAAGCTCATTTAATGGATG
AAGACTTTGTTGAAGCTCTGGAATACGGTATGCCGCCAACAGGAGGTTTAGGCATCGGTATCGACCGTCTGGTTATGCTG
CTGACGAATGCCCCTTCTATTCGCGATGTGCTGTTATTCCCGCAAATGAGACAACGCTAA

Protein sequence :
MSQEEHNHEELNDQLQVRRDKMNQLRDNGIDPFGARFERTHQSQEVISAYQDLTKEELEEKAIEVTIAGRMMTKRGKGKA
GFAHLQDLEGQIQIYVRKDSVGDDQYEIFKSSDLGDLIGVTGKVFKTNVGELSVKATSFELLTKALRPLPDKYHGLKDVE
QRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIPGGASARPFITHHNALDIPLYMRIAIELHL
KRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQIDLKPEW
KRIHMVDAVKEATGVDFWEEVTVEQAREYAKEHEVEIKDSMTVGHIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNP
EDPRFTDRFELFIVGREHANAFTELNDPIDQRERFEAQLKEREAGNDEAHLMDEDFVEALEYGMPPTGGLGIGIDRLVML
LTNAPSIRDVLLFPQMRQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 4e-126 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_006628269.1 lysyl-tRNA synthetase VFG1668 Protein 2e-126 53