Gene Information

Name : ydfA (B657_05340)
Accession : YP_006628701.1
Strain : Bacillus subtilis QB928
Genome accession: NC_018520
Putative virulence/resistance : Resistance
Product : metal-anion antiporter protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 559389 - 560696 bp
Length : 1308 bp
Strand : +
Note : -

DNA sequence : 
TTGACATCAATGATTTTGGCAGTATTCATCTTTTTATTAACTCTAGTATTGGTCATATGGCAGCCGAAAAATTTATCTAT
AGGGTGGTCAGCCTGTGGAGGCGCAGTTTTAGCTCTAATAGCAGGTGTTGTCAATTTTCATGATGTGTTAACTGTGACAG
GGATTGTTTGGAATGCGACCTTGGCTTTTGTGGCCATCATACTGATATCGTTAATTCTTGATAATATCGGTTTCTTTGAA
TGGGCAGCGCTTCATATGGCTAAGGCTGCAAAAGGATACGGTGTGCGGATGTTCGTTTATGTATCTCTATTAGGAGCTAT
CGTCGCCGCGTTATTTGCAAATGACGGTGCAGCTCTTATATTGACACCAATCGTATTAGCGATGGTCAGAGCATTACATT
TTAATGAAAAATTAGTTTTTCCTTTTATCATTGCCAGCGGATTTATTGCGGATACCACTTCGCTTCCTTTTGTAGTAAGC
AATTTGGTCAACATTGTTTCAGCGGACTATTTTCATATTACGTTTATTGATTATGCATCCAGAATGGTTGTCCCGTACCT
GTTTTCGCTGCTGGCGAGCATCATTGTACTTTACCTTTTCTTTAGAAAAAGCATACCAAAACGCTATGATCTGACTGAGG
TTAAAAAACCTGTTGAAGCAATTAAAGATCAAAACATGTTCAGACTGTCATGGTATATCTTAGGGCTGCTGTTAATTGGA
TATTTTGCAAGTGAATTTTTTTCTATCCCTGTATCAGTGGTAGCGGGCAGCATTGCAATCATTTTCTTAATCGCTGCGCA
AAAGAGTCCGGCCGTCCATACAAAGAAAGTGGTGAAAGAGGCGCCATGGGCTATCGTATTCTTTTCAATTGGCATGTACG
TTGTTGTGTATGGTGTCCGAAATGCCGGATTAACGGATGTCCTTTCAGATGTGATTCAAGCCGCAGCTGATCAAGGATTG
TTTGCTGGGACAATTGGAATGGGCTTTATTGCGGCGATTCTTTCTTCCATTATGAATAACTTGCCGACTGTTATGATTGA
CGCATTGGCCATTGCCGGTACAGATACACATGGGATGATGAGAGAAGCGCTTATTTATGCAAATGTGATCGGTTCAGATT
TAGGGCCTAAAATAACACCGATTGGTTCCTTAGCGACATTATTATGGCTTCATGTTCTTTCGCACAAAGGTATGAAGATT
TCCTGGGGCACGTATTTTAAAACAGGAATTATCCTCACGATACCCACTTTATTGATCACACTTGTCGGCCTGTATATTTG
GCTGCTGATAATCCATTCTTGTTTCTAA

Protein sequence : 
MTSMILAVFIFLLTLVLVIWQPKNLSIGWSACGGAVLALIAGVVNFHDVLTVTGIVWNATLAFVAIILISLILDNIGFFE
WAALHMAKAAKGYGVRMFVYVSLLGAIVAALFANDGAALILTPIVLAMVRALHFNEKLVFPFIIASGFIADTTSLPFVVS
NLVNIVSADYFHITFIDYASRMVVPYLFSLLASIIVLYLFFRKSIPKRYDLTEVKKPVEAIKDQNMFRLSWYILGLLLIG
YFASEFFSIPVSVVAGSIAIIFLIAAQKSPAVHTKKVVKEAPWAIVFFSIGMYVVVYGVRNAGLTDVLSDVIQAAADQGL
FAGTIGMGFIAAILSSIMNNLPTVMIDALAIAGTDTHGMMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSHKGMKI
SWGTYFKTGIILTIPTLLITLVGLYIWLLIIHSCF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 5e-127 69
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-123 68
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-129 67
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-107 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ydfA YP_006628701.1 metal-anion antiporter protein BAC0574 Protein 2e-125 69
ydfA YP_006628701.1 metal-anion antiporter protein BAC0575 Protein 1e-129 68
ydfA YP_006628701.1 metal-anion antiporter protein BAC0576 Protein 4e-106 60
ydfA YP_006628701.1 metal-anion antiporter protein BAC0578 Protein 3e-105 60
ydfA YP_006628701.1 metal-anion antiporter protein BAC0031 Protein 4e-103 59
ydfA YP_006628701.1 metal-anion antiporter protein BAC0577 Protein 5e-104 58