|
Name : BN118_0081 (BN118_0081) Accession : YP_006624865.1 Strain : Bordetella pertussis 18323 Genome accession: NC_018518 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 93356 - 95008 bp Length : 1653 bp Strand : + Note : - DNA sequence : ATGATATTTCGCAAGCGCGATCTCCAACATCGCCCGGTGGTGCTGCGCATCGCGGGCCTGTCCCTGGTGGACGGGCAGCC GGGCGCCGGCAGCGCCATCTTGCGGGATATCGACGTCGATATCCGGCAGGGCGAGACGGTCTGCCTGGTGGGCGAAAGCG GCTCGGGCAAGTCCATGACCTCGCTGGCGGTCATGGGCCTGCTGCCCAAGGGGCATCTGCGGGTGACAGGCGGACGCATC GAACTCGATGGCCAGAACCTGCTCGACCTCGGGCCGGCCGCCTTGCGGGACTTGCGCGCCAAGCGCATTTCCATGATTTT CCAGGAGCCCATGACGGCCCTGAACCCGGTCATGAAGGTGGGGCCGCAGATCGAAGAGGTGCTGGACAGCCACACGGCGC TGCCCAGGCGCGAGAAAAAGCAGCGCGTGCTCGACATCATGGAGCAGGTCCACCTGCCCGACGTGGCGCGTATCTACGAG TCCTATCCGCACCAGCTCTCCGGTGGGCAGCGCCAGCGCATCATGATCGCCATGGCGCTGGTGCTGGAGCCGCGGCTGCT GATCGCCGACGAGCCGACCACCGCGCTGGACGTCACCACGCAGAACCAGGTGCTCAAGCTGATCAGCGAGCTGCAGCACA AGCACGATACGGCGGTGCTGTTCATCACCCATGACATGGGGGTGGTGGCCGAGATCGCCGACCGGGTCTATGTCATGCGC CTGGGCGAAATCGTCGAGAGCGCGCCGGTCGAGCAATTGTTGCGCGAACCGCGGCAGGACTACACCCGCAAGTTGCTCAA GTCGGTGCCCAGCCTGATTCCGCGGCCCGGCCGGGCCGCGCCGCAGGCGTGCGCCACGCTGCAGGTGCAGGGGCTTGCGA AACGCTATGCGATGGGCGGGTTCCCGGGCCGCCGGCGGGAAGTCCAGGCCGCGCACGATGTCGCGTTCAGCATCCAGCCC GGCCGTACGCTGGGCATCGTGGGCGAGAGCGGCTCGGGCAAGTCCACGGTGGCGCGCTGCGTGATGCGGCTGATCGAGCC GAGCGAAGGCGCCATCCGTGTCGGCGATGCCGATATCGCGCGGCTGGGCCCCAGGCAGCTCAAGCCGTTTCGCAAGCATC TGCAGATCGTCTTCCAGGATCCGTACCGTTCGCTCAACCCCCGCCGCACCATCGGCGCCAGCCTGATCGAAGGGCCGGTG AACTTCGGGCAGGACAGGCAGGCCGCGCTGGCGCAGGCGGCCGAATTGCTGGAGCTGGTGGGCCTGCCGGCCGACGCCCT GGCGCGCTATCCCCATCAGTTCTCGGGCGGGCAGCGGCAGCGCATCGCCATCGCGCGCGCCATCGCCATGCGGCCCGACG TCCTGGTGGCCGACGAGGCGGTGTCCGCGCTCGATGTCTCGGTACAGGCGCAGGTGCTCGAATTGCTCGACACGCTGCAG CGCAAGCTGGACATCGCGATTCTGTTCATCACGCACGATCTGCGGGTGGCCGCGCAGATCTGCGACGAGGTCATGGTGAT GCGGCATGGCCGCGTGGTGGAGCACGACACGGCCGAGAATGTCCTGGCGCGGCCCGCGCACGCCTACACGCGCGCGTTGA TCGAGGCCGCGCCGGGACGCGATTGGGACTTTGCCAACTTTCGCGAACGGTAG Protein sequence : MIFRKRDLQHRPVVLRIAGLSLVDGQPGAGSAILRDIDVDIRQGETVCLVGESGSGKSMTSLAVMGLLPKGHLRVTGGRI ELDGQNLLDLGPAALRDLRAKRISMIFQEPMTALNPVMKVGPQIEEVLDSHTALPRREKKQRVLDIMEQVHLPDVARIYE SYPHQLSGGQRQRIMIAMALVLEPRLLIADEPTTALDVTTQNQVLKLISELQHKHDTAVLFITHDMGVVAEIADRVYVMR LGEIVESAPVEQLLREPRQDYTRKLLKSVPSLIPRPGRAAPQACATLQVQGLAKRYAMGGFPGRRREVQAAHDVAFSIQP GRTLGIVGESGSGKSTVARCVMRLIEPSEGAIRVGDADIARLGPRQLKPFRKHLQIVFQDPYRSLNPRRTIGASLIEGPV NFGQDRQAALAQAAELLELVGLPADALARYPHQFSGGQRQRIAIARAIAMRPDVLVADEAVSALDVSVQAQVLELLDTLQ RKLDIAILFITHDLRVAAQICDEVMVMRHGRVVEHDTAENVLARPAHAYTRALIEAAPGRDWDFANFRER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-94 | 45 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-79 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-79 | 42 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-79 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-79 | 42 |
