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Name : gabD (BN118_0466) Accession : YP_006625212.1 Strain : Bordetella pertussis 18323 Genome accession: NC_018518 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 488819 - 490300 bp Length : 1482 bp Strand : + Note : - DNA sequence : ATGTCCTTATCCGTCGGCAACGCCGCGCTGCTGCCTGGCCGCAACCTGATTGGATCGGAATGGCGCGAAGCGGCGCTGGG CGCGCGCTTCGCGGTTGCGGATCCCGCCACCGGCAAGGTGATCGCGCATGTGCCCGACAGCGGCGCGCGCGATGCGGGCG CGGCCGTCACGGCGGCGCACCAGGCCTTCGCGGACTGGCGCCGGACCCCCGCCAAGGTCCGCGCGCAGATCATCAAGCGC TGGAATGCCCTGTTGCACGAGAACGCCGAAGACCTGGCCCGTCTGATTTCCTCGGAGCAGGGCAAGCCGCTGGCCGAGGC TCGCGGCGAGGTGAGCTATGCGGCCAGTTATGTCGAGTGGTTCGCCGAAGAGGCCACGCGCGCCGACGGCGACCTCATCC CCAGCCCGGCGCAAGGGCGGCGCATGTTCGCGCTGCGCGAGCCGGTCGGCGTGGTGGCGGCGATCACGCCGTGGAACTTC CCGGCGGCCATGATCGCCCGCAAGATCGCCCCGGCCCTGGCGGCCGGGTGCACGGTCGTGTGCAAGCCGGCCGAGGACAC GCCGCTGACGTCGCTGGCGCTGACGGCCCTGGCGCAGCAGGCGGGGGTGCCGCCCGGCGTGCTCAACATCGTGACCGCCT CGCGGGGCCGCGCCGCCGAAGTCGCCGACGCCTGGCTGGACGACCCGCGCGTGCGCAAGATCACCTTTACCGGCTCCACC CCCGTGGGCAAGCATCTGGCCAGGCGCAGCGCCGACACCTTGAAGCGGGTCTCGCTGGAGCTGGGCGGCAATGCGCCTTT CATTGTGTTCGACGACGCCGACCTGGACGCCGCGGTCGAGGGCCTGATGGTGTCCAAGTTCCGCAATGGCGGCCAGACCT GCGTCTGTCCCAACCGCATCTTCGTGCAGGCCGGCGTGCACGACGCGTTCGTCCGCAAGCTGGCGGCGCGGGTGGAGGGG CTGGTCGTCGGGCCGGCCAGCGACCCGGCTTCGCAGATCGGGCCGATGATCAACGCGCGCGCCGTCGAGAAGATCGAGCA TCACGTCGCCGACGCCCTGGAGCGCGGCGCTCGCCTGGCAGTGGGCGGCAAGCGCATCCACTCGGCCCGTTGCGCCGGCG ACCACTATTACGCGCCGACCGTGCTGACGGGGGTGGACGAGACCATGGCGTGCTTTCGCGAGGAAACCTTCGGGCCGGTT GCGCCGATCACGGTCTTCGCCAGCGAGGCCGAGGTGGTGGCGGCGGCCAATGCGACCGCGTTCGGCCTGGCCGCCTACTT CTACTCGACCGACGTGCGGCGCATCTGGCGCCTGGCCGACGCGCTGGAGACCGGCATCGTCGGCGTCAACGAGGGCGCGC TGGCCGCCGAGGCGGCCCCGTTCGGCGGCGTCAAGGACTCGGGTTACGGCCGCGAAGGATCGCGCCATGGCCTGGCCGAG TACATGCAGATCAAGTACGTCTGCCAGGGCCAGCTGGACTGA Protein sequence : MSLSVGNAALLPGRNLIGSEWREAALGARFAVADPATGKVIAHVPDSGARDAGAAVTAAHQAFADWRRTPAKVRAQIIKR WNALLHENAEDLARLISSEQGKPLAEARGEVSYAASYVEWFAEEATRADGDLIPSPAQGRRMFALREPVGVVAAITPWNF PAAMIARKIAPALAAGCTVVCKPAEDTPLTSLALTALAQQAGVPPGVLNIVTASRGRAAEVADAWLDDPRVRKITFTGST PVGKHLARRSADTLKRVSLELGGNAPFIVFDDADLDAAVEGLMVSKFRNGGQTCVCPNRIFVQAGVHDAFVRKLAARVEG LVVGPASDPASQIGPMINARAVEKIEHHVADALERGARLAVGGKRIHSARCAGDHYYAPTVLTGVDETMACFREETFGPV APITVFASEAEVVAAANATAFGLAAYFYSTDVRRIWRLADALETGIVGVNEGALAAEAAPFGGVKDSGYGREGSRHGLAE YMQIKYVCQGQLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-116 | 56 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 5e-74 | 41 |
