|
Name : BN118_3711 (BN118_3711) Accession : YP_006628133.1 Strain : Bordetella pertussis 18323 Genome accession: NC_018518 Putative virulence/resistance : Virulence Product : orn/arg/lys decarboxylase Function : - COG functional category : - COG ID : - EC number : 4.1.1.19 Position : 4000785 - 4003055 bp Length : 2271 bp Strand : - Note : - DNA sequence : ATGAAATTCCGCTTCCCCATTTTCATCATCGACGAAGACTATCGCTCCGAGAACGCCTCGGGGTTGGGCATTCGCGCGCT GGCTTCGGCGATCGAGGCCGAGGGCGTGGAGGTCATCGGGGTGACCAGCTACGGCGACCTGAGCTCGTTTGCCCAGCAGC AAAGCCGCGCCAGCGCCTTCATCCTGTCGATCGACGATGAGGAGTTCGACGTCGATTCTCCGGAAGACGTGGCGGGCGCG ATCAAGAACCTGCGCACGTTCATCGGCGAGCTGCGTTTCCGCAACGCCGACATCCCCATCTACCTGTACGGCGAGACGCG CACGTCGGAACACATCCCGAACGACATCCTGCGCGAGCTGCACGGCTTCATCCACATGTTCGAGGACACGCCGGAGTTCG TGGCGCGCCACATCATCCGCGAAGCGCGCAGCTACGTGGACGGCCTGCCGCCGCCGTTCTTCCGCGAGCTGGTCAAATAT GCCCAGGACGGTTCGTATTCCTGGCACTGCCCGGGGCACTCGGGCGGCGTGGCGTTCCTCAAGAGCCCGGTGGGCCAGAT GTTCCACCAGTTCTTCGGCGAGAACATGCTGCGCGCCGACGTCTGCAACGCGGTCGACGAGCTGGGCCAGCTGCTGGACC ACACCGGCCCGGTGGCCGAGTCCGAGCTGAATGCCGCGCGCATTTTCCATGCCGACCACTGCTTCTTCGTCACCAACGGC ACCTCGACGTCGAACAAGGTCGTCTGGCATGCCAACGTGGCCGCCGGCGACGTGGTGGTGGTGGACCGCAACTGCCACAA GTCGATCCTGCACGCCATCACCATGACCGGCGCGATCCCGGTGTTCCTGCGCCCCACGCGCAACCACCTGGGCATCATCG GACCGATCCCGCTCGACGAATTCGACCCGGAAAACATCCGCCGCAAGATCGAGGCCAACCCGTTCGCGCGCGAGGCGCTG AACAAGAAGCCGCGCATCCTCACGCTGACGCAGAGCACCTATGACGGCGTCATCTACAACGTCGAGATGATCAAGGAAAA GCTGGGCACCTACGTCGACACGCTGCATTTCGACGAGGCCTGGCTGCCGCACGCGGCCTTCCACGAGTACTACCGCGACA TGCACGCGATCGGCCCGGACCGCCCGCGCAGCCAGGACGCCATGGTGTTCGCCACGCACTCCACGCACAAGCTGCTGGCC GGCATCTCGCAGGCCTCGCAGATCATCGTGCAGGAGTCCGAGAGCCGCAAGCTGGACCGCAACCTCTTCAACGAGGCCTA CCTGATGCATACGTCGACCTCGCCGCAGTACGCGATCATCGCGTCGTGCGACGTGGCCGCCGCCATGATGGAGCCGCCGG GCGGCACCGCCCTGGTCGAGGAAAGCATCCGCGAGGCCATGGACTTTCGCCGCGCCATGCGCAAGGTGGCCTCCGAGTTC GGCAAGGACGACTGGTGGTTCAAGGTGTGGGGCCCCAACCGCCTCGCGCCCGAGGGCATCGGCCATCGCGACGACTGGGT GCTGGAGTCGGGCGACCACTGGCACGGCTTTGGCGACCTGGCGCCGGGCTTCAACATGCTCGACCCGATCAAGGCCACCA TCATCACCCCGGGCCTGGACATGTCGGGCAGCTTCGGCGAAAGCGGCATACCGGCCGCGCTGGTGTCGAAGTACCTGGCC GAGCACGGCGTCGTGGTGGAGAAGACCGGCCTGTATTCGTTCTTCATCCTGTTCACCATCGGTATCACCAAGGGCCGCTG GAACACCCTGCTGACCGCGCTGCAGCAGTTCAAGGACGACTACGACCGCAACCAGCCCCTGTGGCGCATCCTGCCCGAGT TCTGCCGCGGTCACCGCCGCTACGAGCGCATGGGCCTGCGCGACCTATGCCAGCAGATCCACGAGGCCTATCGCGAACGC GACGTGGCGCGCCTGACCACCGAGATGTACCTGAGCGACATGGTGCCGGCGCTCAAGCCCTCGGACGCCTTCGCCCGCAT GGCGCACCGCGAAGTCGAGCGCGTCGAGATCGACCAGCTCGAAGGCCGCGTGACCGGCGTGCTGCTCACGCCGTACCCGC CGGGCATTCCGCTGCTGATCCCGGGCGAGCGCTTCAACCGGACCATCGTGCAATACCTGCAGTTCGCGCGCGAGTTCAAC GAGCGCTTCCCCGGCTTCGAGACCTACATCCACGGCCTGGCCGACGAAGAGGGCCCCGATGGCGCCAAGCGCTATTACGT CGACTGCCTGAAGGACGCCGGCGAGCAGTAA Protein sequence : MKFRFPIFIIDEDYRSENASGLGIRALASAIEAEGVEVIGVTSYGDLSSFAQQQSRASAFILSIDDEEFDVDSPEDVAGA IKNLRTFIGELRFRNADIPIYLYGETRTSEHIPNDILRELHGFIHMFEDTPEFVARHIIREARSYVDGLPPPFFRELVKY AQDGSYSWHCPGHSGGVAFLKSPVGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAESELNAARIFHADHCFFVTNG TSTSNKVVWHANVAAGDVVVVDRNCHKSILHAITMTGAIPVFLRPTRNHLGIIGPIPLDEFDPENIRRKIEANPFAREAL NKKPRILTLTQSTYDGVIYNVEMIKEKLGTYVDTLHFDEAWLPHAAFHEYYRDMHAIGPDRPRSQDAMVFATHSTHKLLA GISQASQIIVQESESRKLDRNLFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIREAMDFRRAMRKVASEF GKDDWWFKVWGPNRLAPEGIGHRDDWVLESGDHWHGFGDLAPGFNMLDPIKATIITPGLDMSGSFGESGIPAALVSKYLA EHGVVVEKTGLYSFFILFTIGITKGRWNTLLTALQQFKDDYDRNQPLWRILPEFCRGHRRYERMGLRDLCQQIHEAYRER DVARLTTEMYLSDMVPALKPSDAFARMAHREVERVEIDQLEGRVTGVLLTPYPPGIPLLIPGERFNRTIVQYLQFAREFN ERFPGFETYIHGLADEEGPDGAKRYYVDCLKDAGEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 9e-102 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BN118_3711 | YP_006628133.1 | orn/arg/lys decarboxylase | VFG1670 | Protein | 5e-102 | 43 |
