Gene Information

Name : glcE (BN118_2906)
Accession : YP_006627407.1
Strain : Bordetella pertussis 18323
Genome accession: NC_018518
Putative virulence/resistance : Unknown
Product : glycolate oxidase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3173066 - 3174175 bp
Length : 1110 bp
Strand : -
Note : -

DNA sequence :
ATGGATTTCGTCCTGTCGGAGTTGTGCGATCAGGTGATGACGGCGCGCGCCGGTCACAAGCCTCTGTTCATCGTCGGTGG
CGGCACCAAAGGGTTTTACGGCAATCATCGTGCCGTGACGCCGCAGGATGGCCACTGCCTGCTGGATATGACCCCTTATC
GCGGCATCGTCAGCTACCAGCCTTCGGAACTGGTGGTGACGGCGCGCGCGGGTACGCCGCTGGCCGAGCTCGAGGCGGCG
CTGGCCGAGCACGGCCAGATGCTGGCTTTCGAGCCGCCGCATTTCGGGCCTGGCGCGACGCTGGGCGGTTGCGTGGCCGC
CGGCCTGTCCGGGCCGCGCCGCATGGCCGCCGGCGCCGTGCGCGATTTCGTGCTGGGCGCGCGCCTGCTGGATTCGCAGG
GCCATATCCTGGCGTTTGGCGGGGAAGTCATGAAGAACGTGGCCGGCTATGACGTCTCGCGGCTGCAGGCCGGCGCGCAA
GGGATTTTCGGCGCCTTGCTGGAAGTCTCGCTGAAAGTCGTGCCCCGGCCGGCCGTGGTGGAGTCGTTGCGGTTGCCCGC
CACGCAGGACGAGGCTCTGCGCTGGTTCGGACAATGGCGCGGGCGGCCGCTGCCGATCTCGGCCAGTTGCTGGACGGCCG
ATGGCGCGGCCGACGGCGGCGGCGCGGTGGTGCTGCGGCTGGCCGGCGCGCCGCCGGCGGTGCAGGCGGCCCGCGAAGTC
CTGGGCGGAGAACTGCTGGATGCGGCGCAGGCCCACGACTGGTGGGAGTCCTTGCGCGAGCAGAGCCATGCCTTCTTCGA
TCGCGGCATGCCCCTGTGGCGGCTGGCGGTGCCGCCCACCGCGCCCGCGCTGGCGCTGGGCCCCACCCTGATCGAATGGG
GCGGCGGACAGCGCTGGCTCAGCGGCCACTACGATGCGCAGGCGGTGCGCGCGGCGGCCGCCCAGGCGGGTGGGCATGCC
ACGCTGTTTCGTGCCGCCGGCCGCGCGGCGCCGGCCGACGGCGTGTTCCATCCCCTTTCGGACGGCGTGGCGGCCATCAC
GCGCCGCCTCAAGCAGGAGCTGGATCCGGCCGGCCTGTTCAACCCCGGGCGTCTGGTGCCGGAACTCTAG

Protein sequence :
MDFVLSELCDQVMTARAGHKPLFIVGGGTKGFYGNHRAVTPQDGHCLLDMTPYRGIVSYQPSELVVTARAGTPLAELEAA
LAEHGQMLAFEPPHFGPGATLGGCVAAGLSGPRRMAAGAVRDFVLGARLLDSQGHILAFGGEVMKNVAGYDVSRLQAGAQ
GIFGALLEVSLKVVPRPAVVESLRLPATQDEALRWFGQWRGRPLPISASCWTADGAADGGGAVVLRLAGAPPAVQAAREV
LGGELLDAAQAHDWWESLREQSHAFFDRGMPLWRLAVPPTAPALALGPTLIEWGGGQRWLSGHYDAQAVRAAAAQAGGHA
TLFRAAGRAAPADGVFHPLSDGVAAITRRLKQELDPAGLFNPGRLVPEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcE CAE85244.1 GlcE protein Not tested PAI V 536 Protein 4e-49 47