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Name : BN118_2556 (BN118_2556) Accession : YP_006627086.1 Strain : Bordetella pertussis 18323 Genome accession: NC_018518 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 2788215 - 2789570 bp Length : 1356 bp Strand : - Note : - DNA sequence : ATGCTAGATCCGATACTGCTGCGCAAAGACCTGCAAACCGTCGTCGACCGCCTCAAGAGCCGTGGCGTCGATTTCGACAT CGCCCGGTTCAACGAGCTGGAGTCCCGCCGCAAGGCCGTCCAGACCGAAACCGAGTCGCAGCAGGCGCGCCGCAATGCCT TGGCCAAGCAGATCGGCCAGCTCAAGGGCAAAGGCGCACCCGAAGCGGAAGTGCAGGCCGTGATGGCCGAGTCGCAGGCC TTGCCGGCCCGGCTCAAGGCGCTCGAGGACGAACTGGCGCAGACGCAGGCGCAACTCAACGACCTGCTGATGTCCGTGCC CAACCTGCCGCACGCTAGCGTGCCGCAGGGCGCGTCCAGCGACGAGAACGTCGAGGTGCGGCGTTGGCTGCCGGGCGCGG CCGACGAGCGCGGCATCCCTGCGGCGCTGGGTTTCGAGGTGCGGGATCACGTGGCGGTGGGCGAGCCGCTGGGCCTGGAT TTCGATCTGGCCGCACGGCTGTCGGGCGCGCGCTTTTCTTTCATGCGCGGCCAGATGGCGCGCCTGCACCGCGCGCTGGC GCAGTTCATGCTGGACTTGCAGACGGGCACGCATGGCTACACCGAGTGCTACACGCCCTACATCGTCAACAGCTCGACCT TGTTCGGCACCGGCCAACTGCCCAAGTTCAAGGACGACATGTTCTTCGTCACCAAGGGCGGCGGCGACGACGAGCCCAAG GTCGACGAGCAGGGCAACCCGCTGGCGCGCGAAGACCAATACCTGATCTCGACCTCGGAAATCACCCTGACCAGCGTGGT GCGCGAGACCATCGTGGCCGGCGCCGACCTGCCGCTGCGCCTGACCGCGCATACGCCGTGCTTCCGCTCCGAAGCCGGCA GCGGCGGGCGCGATACGCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTCGAGATGGTGCAGATCGCCCATCCCGAG CATTCGTACGAGGCGCTCGAGGAAATGGTCGGCCATGCCGAGCGCGTACTGCAGCTGCTGGAGCTGCCGTACCGCGTCAT GCTGCTGTGCACCGGCGACATGGGTTTCGGCTCGGCCAAGACCTACGACCTGGAGGTCTGGCTGCCGGCGCAGGATACCT GGCGCGAGATCTCCTCGGTTTCCAACTGCGAAACATTCCAGGCGCGCCGCATGCAGGCCCGCTTCCGTAACGCGCAGAAC AAGCCCGAATACGTGCATACGCTCAATGGGTCCGGGCTGGCCGTGGGCCGCGCCCTGGTGGCCGTGCTGGAAAACTGCCA GCAAGCCGACGGCAGCGTGCGGGTGCCGGCCGTGCTGCAGCCCTACATGGGCGGCCTGACCGTTCTCGAACCTTGA Protein sequence : MLDPILLRKDLQTVVDRLKSRGVDFDIARFNELESRRKAVQTETESQQARRNALAKQIGQLKGKGAPEAEVQAVMAESQA LPARLKALEDELAQTQAQLNDLLMSVPNLPHASVPQGASSDENVEVRRWLPGAADERGIPAALGFEVRDHVAVGEPLGLD FDLAARLSGARFSFMRGQMARLHRALAQFMLDLQTGTHGYTECYTPYIVNSSTLFGTGQLPKFKDDMFFVTKGGGDDEPK VDEQGNPLAREDQYLISTSEITLTSVVRETIVAGADLPLRLTAHTPCFRSEAGSGGRDTRGMIRQHQFDKVEMVQIAHPE HSYEALEEMVGHAERVLQLLELPYRVMLLCTGDMGFGSAKTYDLEVWLPAQDTWREISSVSNCETFQARRMQARFRNAQN KPEYVHTLNGSGLAVGRALVAVLENCQQADGSVRVPAVLQPYMGGLTVLEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-97 | 50 |
